Gene table of APOB : apolipoprotein B

Gene-disease associations table

Disease IDDisease nameSource of annotation with APOBOMIM linkNumber of associated genesgenes
143890HYPERCHOLESTEROLEMIA, FAMILIALClinVar link to OMIM 10APOA2, ITIH4, EPHX2, PCSK9, STAP1, PPP1R17, ABCA1, APOB, LDLR, GHR
615558HYPOBETALIPOPROTEINEMIA, FAMILIAL, 1OMIM, HUMSAVAR link to OMIM 1APOB
144010HYPERCHOLESTEROLEMIA, AUTOSOMAL DOMINANT, TYPE BClinVar, OMIM, HUMSAVAR link to OMIM 1APOB

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Annotation of the gene APOB

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST

It is regulated by the following TF:

Associated KEGG pathways
KEGG pathwayKEGG IDKEGG IC
Fat digestion and absorptionhsa049757.45
Vitamin digestion and absorptionhsa049778.24
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
Retinoid metabolism and transportR-HSA-9756347.59
Scavenging by Class A ReceptorsR-HSA-30004808.73
Binding and Uptake of Ligands by Scavenger ReceptorsR-HSA-21737825.38
Lipoprotein metabolismR-HSA-1748248.23
Visual phototransductionR-HSA-21873386.44
LDL-mediated lipid transportR-HSA-17105210.66
Lipid digestion, mobilization, and transportR-HSA-739237.2
Cell surface interactions at the vascular wallR-HSA-2027336.32
Metabolism of lipids and lipoproteinsR-HSA-5568333.79
MetabolismR-HSA-14307282.34
Signal TransductionR-HSA-1625821.78
Platelet homeostasisR-HSA-4183466.68
Scavenging by Class H ReceptorsR-HSA-300049710.98
Platelet sensitization by LDLR-HSA-4321428.89
Scavenging by Class B ReceptorsR-HSA-300047110.66
Scavenging by Class F ReceptorsR-HSA-300048410.4
HemostasisR-HSA-1095823.98
Chylomicron-mediated lipid transportR-HSA-1748009.18
Vesicle-mediated transportR-HSA-56536564.33
Associated GO terms for Molecular function
GO termGO IDGO IC
lipid transporter activityGO:00053195.03
sulfur compound bindingGO:19016814.32
enzyme bindingGO:00198992.27
substrate-specific transporter activityGO:00228922.72
glycosaminoglycan bindingGO:00055394.42
carbohydrate derivative bindingGO:00973672.03
lipoprotein particle receptor bindingGO:00703256.65
phospholipid bindingGO:00055433.91
lipid bindingGO:00082893.26
cholesterol transporter activityGO:00171277.17
heparin bindingGO:00082014.68
lipase bindingGO:00354737.95
bindingGO:00054880.18
protein bindingGO:00055150.46
transporter activityGO:00052152.57
receptor bindingGO:00051022.43
sterol transporter activityGO:00152486.85
low-density lipoprotein particle receptor bindingGO:00507506.91