Gene table of ARID1A : AT-rich interaction domain 1A

Gene-disease associations table

Disease IDDisease nameSource of annotation with ARID1AOMIM linkNumber of associated genesgenes
PS156200MENTAL RETARDATION, AUTOSOMAL DOMINANTClinVar, OMIM link to OMIM 44EHMT1, KANSL1, AHDC1, SOX11, CDH15, KIRREL3, EEF1A2, KAT6A, ZMYND11, ARID1A, KMT2C, PPP2R5D, DYNC1H1, GRIN1, CTCF, SETD5, AUTS2, PACS1, DPP6, MBD5, DEAF1, KIF1A, SYNGAP1, PURA, POGZ, EPB41L1, PPP2R1A, NR1I3, CTNNB1, ARID1B, MYT1L, CACNG2, COL4A3BP, SMARCB1, MEF2C, SMARCE1, SMARCA4, ZBTB18, ADNP, GATAD2B, SETBP1, GRIN2B, CHAMP1, DYRK1A
PS135900COFFIN-SIRIS SYNDROMEClinVar, OMIM link to OMIM 5SMARCE1, SMARCB1, ARID1B, SMARCA4, ARID1A

Download the gene annotation in CSV format

Annotation of the gene ARID1A

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST

It is a TF of the genes:

Associated KEGG pathways
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
RMTs methylate histone argininesR-HSA-32148587.49
Chromatin organizationR-HSA-48397265.19
Chromatin modifying enzymesR-HSA-32475095.19
Associated GO terms for Molecular function
GO termGO IDGO IC
transcription factor activity, transcription factor bindingGO:00009893.36
protein bindingGO:00055150.46
organic cyclic compound bindingGO:00971591.05
DNA bindingGO:00036771.92
transcription coactivator activityGO:00037134.04
transcription cofactor activityGO:00037123.44
nucleosome bindingGO:00314915.95
macromolecular complex bindingGO:00448772.61
bindingGO:00054880.18
nucleic acid bindingGO:00036761.44
transcription factor activity, protein bindingGO:00009883.35
protein complex bindingGO:00324033.09
receptor bindingGO:00051022.43
chromatin bindingGO:00036823.64
ligand-dependent nuclear receptor bindingGO:00169226.6
heterocyclic compound bindingGO:19013631.06