Gene table of ATXN8OS : ATXN8 opposite strand (non-protein coding)

Gene-disease associations table

Disease IDDisease nameSource of annotation with ATXN8OSOMIM linkNumber of associated genesgenes
PS168600PARKINSON DISEASEClinVar link to OMIM 30ATP13A2, FGF20, VPS13C, DNAJC13, ATXN2, PINK1, CHCHD2, ADH1C, UCHL1, GIGYF2, SYNJ1, PODXL, HTRA2, LRRK2, TBP, PARK2, ATXN8OS, SNCAIP, GBA, SNCA, NR4A2, PLA2G6, GLUD2, PARK7, ATXN3, MAPT, DNAJC6, EIF4G1, FBXO7, VPS35
PS164400SPINOCEREBELLAR ATAXIAClinVar, OMIM link to OMIM 31PRKCG, ATXN2, SCYL1, PDYN, ELOVL5, ATXN10, TRPC3, ATXN8OS, NOP56, ATXN8, TBP, PPP2R2B, ELOVL4, PLEKHG4, ATXN7, AFG3L2, BEAN1, CACNA1A, ATXN1, TTBK2, KCND3, CACNA1G, TMEM240, ATXN3, KCNC3, SPTBN2, TGM6, CCDC88C, FGF14, ITPR1, EEF2

Download the gene annotation in CSV format

Annotation of the gene ATXN8OS

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST
Associated KEGG pathways
Associated REACTOME pathways
Associated GO terms for Molecular function
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<type 'exceptions.KeyError'>
Python 2.7.9: /usr/bin/python
Sat Feb 4 02:35:26 2023

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /usr/lib/cgi-bin/gene_disease_db/gene.py in ()
    475 kegg_ann(gene)
    476 react_ann(gene)
=>  477 GOBPs,GOCCs=GO_ann(gene)
    478 if make_file==True:
    479         outcsv.close()
GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'ATXN8OS'
 /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='ATXN8OS')
    345           print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>'
    346     print '</details>'
=>  347     return root2GO["biological_process"],root2GO["cellular_component"]
    348 
    349 def kegg_ann(gene):
root2GO = {'cellular_component': set(['GO:0005737', 'GO:0044424', 'GO:0044464'])}

<type 'exceptions.KeyError'>: 'biological_process'
      args = ('biological_process',)
      message = 'biological_process'