Gene table of CALM2 : calmodulin 2

Gene-disease associations table

Disease IDDisease nameSource of annotation with CALM2OMIM linkNumber of associated genesgenes
PS192500LONG QT SYNDROMEClinVar, OMIM link to OMIM 16ALG10, KCNJ5, AKAP9, CALM1, CALM2, KCNE1, ANK2, SCN4B, KCNH2, SNTA1, CACNA1C, KCNE2, KCNJ2, KCNQ1, CAV3, SCN5A

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Annotation of the gene CALM2

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST
Associated KEGG pathways
KEGG pathwayKEGG IDKEGG IC
Pertussishsa051336.46
cGMP-PKG signaling pathwayhsa040225.32
Calcium signaling pathwayhsa040205.22
cAMP signaling pathwayhsa040245.05
Long-term potentiationhsa047206.64
Neurotrophin signaling pathwayhsa047225.78
Olfactory transductionhsa047404.13
Dopaminergic synapsehsa047285.69
Oxytocin signaling pathwayhsa049215.4
Amphetamine addictionhsa050316.62
Vascular smooth muscle contractionhsa042705.74
Oocyte meiosishsa041145.91
GnRH signaling pathwayhsa049126.18
Phosphatidylinositol signaling systemhsa040706.38
Rap1 signaling pathwayhsa040154.97
Ras signaling pathwayhsa040144.9
Inflammatory mediator regulation of TRP channelshsa047506.07
Gliomahsa052146.66
Estrogen signaling pathwayhsa049156.11
Circadian entrainmenthsa047136.11
Salivary secretionhsa049706.23
Gastric acid secretionhsa049716.48
Insulin signaling pathwayhsa049105.55
Phototransductionhsa047447.91
Alcoholismhsa050345.59
Tuberculosishsa051525.17
Melanogenesishsa049165.97
Alzheimer's diseasehsa050105.34
Adrenergic signaling in cardiomyocyteshsa042615.44
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
CREB phosphorylation through the activation of CaMKIIR-HSA-4427299.08
PLCG1 events in ERBB2 signalingR-HSA-12519327.85
Visual phototransductionR-HSA-21873386.44
Platelet degranulation R-HSA-1146086.68
Ca-dependent eventsR-HSA-1119968.18
Interleukin-2 signalingR-HSA-4519275.05
Signaling by the B Cell Receptor (BCR)R-HSA-9837054.62
Post NMDA receptor activation eventsR-HSA-4380647.85
Developmental BiologyR-HSA-12667383.48
Glucose metabolismR-HSA-703266.77
CaM pathwayR-HSA-1119978.28
Phospholipase C-mediated cascade: FGFR1R-HSA-56542197.43
Signaling by VEGFR-HSA-1941384.66
FCERI mediated MAPK activationR-HSA-28717964.32
IRS-mediated signallingR-HSA-1123994.87
The phototransduction cascadeR-HSA-25148568.03
Neuronal SystemR-HSA-1123164.82
Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic CellR-HSA-1123145.85
Transmission across Chemical SynapsesR-HSA-1123155.28
Inactivation, recovery and regulation of the phototransduction cascadeR-HSA-25148598.08
VEGFA-VEGFR2 PathwayR-HSA-44200974.7
beta-catenin independent WNT signalingR-HSA-38584945.83
Translocation of GLUT4 to the plasma membraneR-HSA-14451486.77
Activation of NMDA receptor upon glutamate binding and postsynaptic eventsR-HSA-4427557.7
Signaling by EGFRR-HSA-1779294.59
Vesicle-mediated transportR-HSA-56536564.33
DAP12 interactionsR-HSA-21721274.56
RHO GTPases activate IQGAPsR-HSA-56264678.34
Downstream signaling of activated FGFR4R-HSA-56547164.71
Signaling by ERBB2R-HSA-12279864.66
VEGFR2 mediated vascular permeabilityR-HSA-52189208.28
VEGFR2 mediated cell proliferationR-HSA-52189215.07
Phospholipase C-mediated cascade; FGFR2R-HSA-56542217.37
DAG and IP3 signalingR-HSA-14895097.98
Phospholipase C-mediated cascade; FGFR3R-HSA-56542277.52
Phospholipase C-mediated cascade; FGFR4R-HSA-56542287.46
Immune SystemR-HSA-1682562.37
eNOS activationR-HSA-2036159.98
Downstream signal transductionR-HSA-1867634.65
Ras activation uopn Ca2+ infux through NMDA receptorR-HSA-4429828.89
Activation of CaMK IVR-HSA-44274511.98
CREB phosphorylation through the activation of RasR-HSA-4427428.23
RAF/MAP kinase cascadeR-HSA-56730015.15
Signalling to p38 via RIT and RINR-HSA-1877065.12
FRS-mediated FGFR2 signalingR-HSA-56547005.14
SOS-mediated signallingR-HSA-1124125.15
FRS-mediated FGFR3 signalingR-HSA-56547065.14
Downstream signaling of activated FGFR3R-HSA-56547084.71
Insulin receptor signalling cascadeR-HSA-747514.85
Fc epsilon receptor (FCERI) signalingR-HSA-24542024.03
Interleukin receptor SHC signalingR-HSA-9125265.09
Innate Immune SystemR-HSA-1682493.17
Signaling by SCF-KITR-HSA-14335574.73
CLEC7A (Dectin-1) induces NFAT activationR-HSA-56077639.52
CLEC7A (Dectin-1) signalingR-HSA-56077646.38
NGF signalling via TRKA from the plasma membraneR-HSA-1870374.51
Prolonged ERK activation eventsR-HSA-1698935.11
Signaling by WntR-HSA-1957214.79
PLC beta mediated eventsR-HSA-1120437.52
G-protein mediated eventsR-HSA-1120407.49
Signaling by FGFR2R-HSA-56547384.68
GRB2 events in EGFR signalingR-HSA-1798125.15
SHC1 events in ERBB4 signalingR-HSA-12503475.15
Glycogen breakdown (glycogenolysis)R-HSA-702219.08
Axon guidanceR-HSA-4224753.93
Smooth Muscle ContractionR-HSA-4453558.23
Signaling by LeptinR-HSA-25865525.1
IGF1R signaling cascadeR-HSA-24289244.85
IRS-related events triggered by IGF1RR-HSA-24289284.85
Signaling by Insulin receptorR-HSA-747524.73
RHO GTPases activate PAKsR-HSA-56271238.59
Cam-PDE 1 activationR-HSA-11195710.98
Downstream signaling of activated FGFR1R-HSA-56546874.71
Metabolism of carbohydratesR-HSA-713874.93
Gastrin-CREB signalling pathway via PKC and MAPKR-HSA-8819074.26
C-type lectin receptors (CLRs)R-HSA-56214816.06
Antigen activates B Cell Receptor (BCR) leading to generation of second messengersR-HSA-9836955.6
FCERI mediated Ca+2 mobilizationR-HSA-28718095.45
GRB2 events in ERBB2 signalingR-HSA-19636405.15
Frs2-mediated activationR-HSA-1709685.12
Signalling to RASR-HSA-1670445.08
EGFR interacts with phospholipase C-gammaR-HSA-2127187.89
CREB phosphorylation through the activation of CaMKKR-HSA-44271710.98
Downstream signaling of activated FGFR2R-HSA-56546964.71
SHC1 events in EGFR signalingR-HSA-1803365.15
FRS-mediated FGFR1 signalingR-HSA-56546935.14
Inositol phosphate metabolismR-HSA-14832497.52
Activation of Ca-permeable Kainate ReceptorR-HSA-4513089.66
SHC1 events in ERBB2 signalingR-HSA-12501965.15
Opioid SignallingR-HSA-1118856.64
Ionotropic activity of Kainate ReceptorsR-HSA-4513069.66
ARMS-mediated activationR-HSA-1709845.12
Signaling by FGFR1R-HSA-56547364.69
Signaling by PDGFR-HSA-1867974.53
Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulationR-HSA-14741519.66
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)R-HSA-24041924.85
Synthesis of IP3 and IP4 in the cytosolR-HSA-18552048.34
Signaling by InterleukinsR-HSA-4491474.71
Muscle contractionR-HSA-3970146.96
Signaling by Rho GTPasesR-HSA-1943154.43
Cytokine Signaling in Immune systemR-HSA-12802153.74
MetabolismR-HSA-14307282.34
Signaling by ERBB4R-HSA-12363944.7
MAPK1/MAPK3 signalingR-HSA-56849965.11
Adaptive Immune SystemR-HSA-12802183.19
Calmodulin induced eventsR-HSA-1119338.28
CaMK IV-mediated phosphorylation of CREBR-HSA-11193211.4
DARPP-32 eventsR-HSA-1800248.4
MAPK family signaling cascadesR-HSA-56830574.89
Signalling by NGFR-HSA-1665204.23
Platelet activation, signaling and aggregationR-HSA-760025.15
Response to elevated platelet cytosolic Ca2+R-HSA-760056.59
Metabolism of nitric oxideR-HSA-2021318.81
Ca2+ pathwayR-HSA-40863987.1
Signaling by FGFR4R-HSA-56547434.69
Signaling by FGFR3R-HSA-56547414.69
Signaling by FGFRR-HSA-1902364.67
eNOS activation and regulationR-HSA-2037658.81
Membrane TraffickingR-HSA-1999915.26
NCAM signaling for neurite out-growthR-HSA-3751654.9
DAP12 signalingR-HSA-24244914.64
Interleukin-3, 5 and GM-CSF signalingR-HSA-5129884.99
RHO GTPase EffectorsR-HSA-1952584.94
FRS-mediated FGFR4 signalingR-HSA-56547125.14
PLC-gamma1 signallingR-HSA-1670217.89
Signaling by GPCRR-HSA-3727902.68
Activation of Kainate Receptors upon glutamate bindingR-HSA-4513268.08
Signalling to ERKsR-HSA-1876875.04
HemostasisR-HSA-1095823.98
Signal TransductionR-HSA-1625821.78
Associated GO terms for Molecular function
GO termGO IDGO IC
metal ion bindingGO:00468721.41
ion bindingGO:00431671.36
bindingGO:00054880.18
cation bindingGO:00431691.4
calcium ion bindingGO:00055093.17
--> -->
 
 
<type 'exceptions.KeyError'>
Python 2.7.9: /usr/bin/python
Fri Apr 19 14:06:50 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /usr/lib/cgi-bin/gene_disease_db/gene.py in ()
    475 kegg_ann(gene)
    476 react_ann(gene)
=>  477 GOBPs,GOCCs=GO_ann(gene)
    478 if make_file==True:
    479         outcsv.close()
GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'CALM2'
 /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='CALM2')
    345           print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>'
    346     print '</details>'
=>  347     return root2GO["biological_process"],root2GO["cellular_component"]
    348 
    349 def kegg_ann(gene):
root2GO = {'molecular_function': set(['GO:0005488', 'GO:0005509', 'GO:0043167', 'GO:0043169', 'GO:0046872'])}

<type 'exceptions.KeyError'>: 'biological_process'
      args = ('biological_process',)
      message = 'biological_process'