Disease ID | Disease name | Source of annotation with CFHR3 | OMIM link | Number of associated genes | genes |
---|---|---|---|---|---|
PS603075 | MACULAR DEGENERATION, AGE-RELATED | OMIM | link to OMIM | 19 | RAX2, HMCN1, ERCC6, TLR4, CFHR3, CFI, CFHR1, CFH, C3, HTRA1, ABCA4, CX3CR1, FBLN5, C2, CFB, CST3, APOE, ARMS2, C9 |
PS235400 | HEMOLYTIC UREMIC SYNDROME | OMIM | link to OMIM | 11 | CFH, CFHR3, CFHR1, BAAT, CFI, THBD, C3AR1, C3, CD46, CFB, DGKE |
Download the gene annotation in CSV format
REACTOME pathway | REACTOME ID | REACTOME IC |
---|---|---|
Complement cascade | R-HSA-166658 | 5.38 |
Innate Immune System | R-HSA-168249 | 3.17 |
Regulation of Complement cascade | R-HSA-977606 | 8.4 |
Immune System | R-HSA-168256 | 2.37 |
<type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Mon Jun 5 07:01:43 2023 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
/usr/lib/cgi-bin/gene_disease_db/gene.py in |
475 kegg_ann(gene) |
476 react_ann(gene) |
=> 477 GOBPs,GOCCs=GO_ann(gene) |
478 if make_file==True: |
479 outcsv.close() |
GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'CFHR3' |
/usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='CFHR3') |
345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
346 print '</details>' |
=> 347 return root2GO["biological_process"],root2GO["cellular_component"] |
348 |
349 def kegg_ann(gene): |
root2GO = {'cellular_component': set(['GO:0005576', 'GO:0005615', 'GO:0031982', 'GO:0031988', 'GO:0043226', 'GO:0043227', ...])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'