| GO term | GO ID | GO IC |
|---|---|---|
| small molecule binding | GO:0036094 | 1.89 |
| organic cyclic compound binding | GO:0097159 | 1.05 |
| nucleotide binding | GO:0000166 | 1.96 |
| AU-rich element binding | GO:0017091 | 6.6 |
| binding | GO:0005488 | 0.18 |
| nucleic acid binding | GO:0003676 | 1.44 |
| heterocyclic compound binding | GO:1901363 | 1.06 |
| nucleoside phosphate binding | GO:1901265 | 1.96 |
| RNA binding | GO:0003723 | 2.36 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Fri Apr 19 19:42:50 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'ELAVL3' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='ELAVL3') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'biological_process': set(['GO:0007275', 'GO:0007399', 'GO:0009987', 'GO:0030154', 'GO:0032501', 'GO:0032502', ...]), 'molecular_function': set(['GO:0000166', 'GO:0003676', 'GO:0003723', 'GO:0005488', 'GO:0017091', 'GO:0036094', ...])} |
<type 'exceptions.KeyError'>: 'cellular_component'
args =
('cellular_component',)
message =
'cellular_component'