GO term | GO ID | GO IC |
---|---|---|
adenyl nucleotide binding | GO:0030554 | 2.4 |
carbohydrate derivative binding | GO:0097367 | 2.03 |
organic cyclic compound binding | GO:0097159 | 1.05 |
ribonucleoside binding | GO:0032549 | 2.22 |
nucleoside phosphate binding | GO:1901265 | 1.96 |
purine ribonucleoside triphosphate binding | GO:0035639 | 2.22 |
heterocyclic compound binding | GO:1901363 | 1.06 |
small molecule binding | GO:0036094 | 1.89 |
ribonucleotide binding | GO:0032553 | 2.19 |
adenyl ribonucleotide binding | GO:0032559 | 2.41 |
binding | GO:0005488 | 0.18 |
protein binding | GO:0005515 | 0.46 |
ATP binding | GO:0005524 | 2.43 |
purine ribonucleotide binding | GO:0032555 | 2.2 |
purine nucleotide binding | GO:0017076 | 2.19 |
nucleotide binding | GO:0000166 | 1.96 |
purine ribonucleoside binding | GO:0032550 | 2.22 |
purine nucleoside binding | GO:0001883 | 2.22 |
nucleoside binding | GO:0001882 | 2.21 |
<type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Sat May 4 08:54:02 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
/usr/lib/cgi-bin/gene_disease_db/gene.py in |
475 kegg_ann(gene) |
476 react_ann(gene) |
=> 477 GOBPs,GOCCs=GO_ann(gene) |
478 if make_file==True: |
479 outcsv.close() |
GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'HSPA13' |
/usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='HSPA13') |
345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
346 print '</details>' |
=> 347 return root2GO["biological_process"],root2GO["cellular_component"] |
348 |
349 def kegg_ann(gene): |
root2GO = {'cellular_component': set(['GO:0005783', 'GO:0031982', 'GO:0031988', 'GO:0043226', 'GO:0043227', 'GO:0043229', ...]), 'molecular_function': set(['GO:0000166', 'GO:0001882', 'GO:0001883', 'GO:0005488', 'GO:0005515', 'GO:0005524', ...])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'