GO term | GO ID | GO IC |
---|---|---|
cation binding | GO:0043169 | 1.4 |
transition metal ion binding | GO:0046914 | 2.48 |
cytoskeletal protein binding | GO:0008092 | 3.02 |
ion binding | GO:0043167 | 1.36 |
actin binding | GO:0003779 | 3.74 |
zinc ion binding | GO:0008270 | 2.66 |
protein binding | GO:0005515 | 0.46 |
metal ion binding | GO:0046872 | 1.41 |
binding | GO:0005488 | 0.18 |
<type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Sat Apr 20 04:11:21 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
/usr/lib/cgi-bin/gene_disease_db/gene.py in |
475 kegg_ann(gene) |
476 react_ann(gene) |
=> 477 GOBPs,GOCCs=GO_ann(gene) |
478 if make_file==True: |
479 outcsv.close() |
GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'LIMCH1' |
/usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='LIMCH1') |
345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
346 print '</details>' |
=> 347 return root2GO["biological_process"],root2GO["cellular_component"] |
348 |
349 def kegg_ann(gene): |
root2GO = {'biological_process': set(['GO:0006996', 'GO:0007010', 'GO:0009987', 'GO:0016043', 'GO:0030029', 'GO:0030036', ...]), 'molecular_function': set(['GO:0003779', 'GO:0005488', 'GO:0005515', 'GO:0008092', 'GO:0008270', 'GO:0043167', ...])} |
<type 'exceptions.KeyError'>: 'cellular_component'
args =
('cellular_component',)
message =
'cellular_component'