| Disease ID | Disease name | Source of annotation with LMNB1 | OMIM link | Number of associated genes | genes |
|---|---|---|---|---|---|
| 169500 | LEUKODYSTROPHY, DEMYELINATING, ADULT-ONSET, AUTOSOMAL DOMINANT | ClinVar, OMIM | link to OMIM | 1 | LMNB1 |
Download the gene annotation in CSV format
| REACTOME pathway | REACTOME ID | REACTOME IC |
|---|---|---|
| Formation of Senescence-Associated Heterochromatin Foci (SAHF) | R-HSA-2559584 | 8.98 |
| DNA Damage/Telomere Stress Induced Senescence | R-HSA-2559586 | 7.15 |
| Cellular Senescence | R-HSA-2559583 | 5.7 |
| Initiation of Nuclear Envelope Reformation | R-HSA-2995383 | 9.28 |
| Apoptotic execution phase | R-HSA-75153 | 7.28 |
| Programmed Cell Death | R-HSA-5357801 | 5.65 |
| Meiotic synapsis | R-HSA-1221632 | 7.18 |
| Cell Cycle | R-HSA-1640170 | 3.89 |
| Mitotic Prophase | R-HSA-68875 | 6.27 |
| Mitotic Metaphase and Anaphase | R-HSA-2555396 | 5.45 |
| Apoptotic cleavage of cellular proteins | R-HSA-111465 | 7.73 |
| Cellular responses to stress | R-HSA-2262752 | 4.56 |
| Cell Cycle, Mitotic | R-HSA-69278 | 4.16 |
| M Phase | R-HSA-68886 | 4.87 |
| Mitotic Anaphase | R-HSA-68882 | 5.46 |
| Clearance of Nuclear Envelope Membranes from Chromatin | R-HSA-2993913 | 9.81 |
| Depolymerisation of the Nuclear Lamina | R-HSA-4419969 | 9.08 |
| Meiosis | R-HSA-1500620 | 6.59 |
| Breakdown of the nuclear lamina | R-HSA-352238 | 11.4 |
| Nuclear Envelope Breakdown | R-HSA-2980766 | 7.34 |
| Apoptosis | R-HSA-109581 | 5.68 |
| Nuclear Envelope Reassembly | R-HSA-2995410 | 9.28 |
| GO term | GO ID | GO IC |
|---|---|---|
| enzyme binding | GO:0019899 | 2.27 |
| phospholipase binding | GO:0043274 | 6.91 |
| binding | GO:0005488 | 0.18 |
| protein binding | GO:0005515 | 0.46 |
| structural molecule activity | GO:0005198 | 3.1 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Mon Mar 27 17:43:19 2023 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'LMNB1' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='LMNB1') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'cellular_component': set(['GO:0005634', 'GO:0005635', 'GO:0005637', 'GO:0005638', 'GO:0005654', 'GO:0005882', ...]), 'molecular_function': set(['GO:0005198', 'GO:0005488', 'GO:0005515', 'GO:0019899', 'GO:0043274'])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'