| GO term | GO ID | GO IC |
|---|---|---|
| catalytic activity | GO:0003824 | 1.05 |
| oxidoreductase activity, acting on CH-OH group of donors | GO:0016614 | 4.83 |
| GO:0016615 | 7.79 | |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | GO:0016616 | 5.0 |
| oxidoreductase activity | GO:0016491 | 3.12 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Mon May 29 18:04:59 2023 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'MDH1B' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='MDH1B') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'biological_process': set(['GO:0005975', 'GO:0006082', 'GO:0006099', 'GO:0006108', 'GO:0008152', 'GO:0009987', ...]), 'molecular_function': set(['GO:0003824', 'GO:0016491', 'GO:0016614', 'GO:0016615', 'GO:0016616'])} |
<type 'exceptions.KeyError'>: 'cellular_component'
args =
('cellular_component',)
message =
'cellular_component'