| GO term | GO ID | GO IC |
|---|---|---|
| organic cyclic compound binding | GO:0097159 | 1.05 |
| poly(A) RNA binding | GO:0044822 | 2.69 |
| binding | GO:0005488 | 0.18 |
| nucleic acid binding | GO:0003676 | 1.44 |
| heterocyclic compound binding | GO:1901363 | 1.06 |
| RNA binding | GO:0003723 | 2.36 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Wed Apr 24 06:56:46 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'NOL7' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='NOL7') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'cellular_component': set(['GO:0005634', 'GO:0005730', 'GO:0005739', 'GO:0043226', 'GO:0043227', 'GO:0043228', ...]), 'molecular_function': set(['GO:0003676', 'GO:0003723', 'GO:0005488', 'GO:0044822', 'GO:0097159', 'GO:1901363'])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'