Gene table of PDE6B : phosphodiesterase 6B

Gene-disease associations table

Disease IDDisease nameSource of annotation with PDE6BOMIM linkNumber of associated genesgenes
PS310500NIGHT BLINDNESS, CONGENITAL STATIONARYClinVar, OMIM, HUMSAVAR link to OMIM 12LRIT3, SLC24A1, GNAT1, NYX, TRPM1, CACNA1F, GRK1, RHO, GPR179, SAG, GRM6, PDE6B
PS268000RETINITIS PIGMENTOSAClinVar, OMIM, HUMSAVAR link to OMIM 69PDE6A, MAK, FSCN2, DHDDS, RHO, RP9, CNGA1, CRB1, SLC7A14, BEST1, CERKL, PRPF3, C8orf37, PROM1, TOPORS, PRPH2, PRCD, SNRNP200, IMPG2, PDE6B, IDH3B, RGR, TTC8, GUCA1B, CDHR1, PANK2, RDH12, BBS2, MERTK, RP1L1, NEK2, USH2A, ZNF408, LRAT, C2orf71, MYO7A, KLHL7, IMPDH1, ZNF513, RP1, NR2E3, PDE6G, ROM1, CYGB, ARL6, NRL, RPGR, PRPF4, RP2, IFT172, HGSNAT, TULP1, CNGB1, KIZ, EYS, OFD1, RPE65, PRPF6, FAM161A, RBP3, IFT140, PRPF8, ABCA4, CLRN1, PRPF31, SAG, CA4, CRX, SEMA4A

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Annotation of the gene PDE6B

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST

It is regulated by the following TF:

Associated KEGG pathways
KEGG pathwayKEGG IDKEGG IC
Phototransductionhsa047447.91
Purine metabolismhsa002305.28
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
Signaling by WntR-HSA-1957214.79
Visual phototransductionR-HSA-21873386.44
beta-catenin independent WNT signalingR-HSA-38584945.83
Activation of the phototransduction cascadeR-HSA-24851799.52
Ca2+ pathwayR-HSA-40863987.1
The phototransduction cascadeR-HSA-25148568.03
Inactivation, recovery and regulation of the phototransduction cascadeR-HSA-25148598.08
Signal TransductionR-HSA-1625821.78
Associated GO terms for Molecular function
GO termGO IDGO IC
hydrolase activityGO:00167871.9
cyclic-nucleotide phosphodiesterase activityGO:00041126.48
cation bindingGO:00431691.4
3',5'-cyclic-nucleotide phosphodiesterase activityGO:00041146.52
phosphoric diester hydrolase activityGO:00080815.23
hydrolase activity, acting on ester bondsGO:00167883.1
ion bindingGO:00431671.36
phosphoric ester hydrolase activityGO:00425783.82
catalytic activityGO:00038241.05
bindingGO:00054880.18
metal ion bindingGO:00468721.41
3',5'-cyclic-GMP phosphodiesterase activityGO:00475557.1