| Disease ID | Disease name | Source of annotation with PLEKHG4 | OMIM link | Number of associated genes | genes |
|---|---|---|---|---|---|
| PS164400 | SPINOCEREBELLAR ATAXIA | ClinVar | link to OMIM | 31 | ATXN10, ATXN2, SCYL1, PDYN, ELOVL5, PRKCG, TRPC3, ATXN8OS, NOP56, ATXN8, TBP, PPP2R2B, ELOVL4, PLEKHG4, ATXN7, AFG3L2, BEAN1, CACNA1A, ATXN1, TTBK2, KCND3, CACNA1G, TMEM240, ATXN3, KCNC3, SPTBN2, TGM6, CCDC88C, FGF14, ITPR1, EEF2 |
Download the gene annotation in CSV format
| GO term | GO ID | GO IC |
|---|---|---|
| Rho guanyl-nucleotide exchange factor activity | GO:0005089 | 5.37 |
| Ras guanyl-nucleotide exchange factor activity | GO:0005088 | 4.31 |
| guanyl-nucleotide exchange factor activity | GO:0005085 | 4.02 |
| binding | GO:0005488 | 0.18 |
| protein binding | GO:0005515 | 0.46 |
| molecular function regulator | GO:0098772 | 2.51 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Mon Mar 27 15:53:29 2023 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'PLEKHG4' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='PLEKHG4') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'biological_process': set(['GO:0009966', 'GO:0010646', 'GO:0023051', 'GO:0035023', 'GO:0043085', 'GO:0043087', ...]), 'molecular_function': set(['GO:0005085', 'GO:0005088', 'GO:0005089', 'GO:0005488', 'GO:0005515', 'GO:0098772'])} |
<type 'exceptions.KeyError'>: 'cellular_component'
args =
('cellular_component',)
message =
'cellular_component'