| GO term | GO ID | GO IC |
|---|---|---|
| sulfur compound binding | GO:1901681 | 4.32 |
| GO:2001065 | 9.05 | |
| metal ion binding | GO:0046872 | 1.41 |
| cation binding | GO:0043169 | 1.4 |
| carbohydrate derivative binding | GO:0097367 | 2.03 |
| polysaccharide binding | GO:0030247 | 6.65 |
| carbohydrate binding | GO:0030246 | 4.17 |
| pattern binding | GO:0001871 | 6.65 |
| glycosaminoglycan binding | GO:0005539 | 4.42 |
| calcium ion binding | GO:0005509 | 3.17 |
| ion binding | GO:0043167 | 1.36 |
| heparin binding | GO:0008201 | 4.68 |
| binding | GO:0005488 | 0.18 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Tue Dec 3 12:06:02 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'REG4' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='REG4') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'cellular_component': set(['GO:0005576', 'GO:0005737', 'GO:0044424', 'GO:0044464']), 'molecular_function': set(['GO:0001871', 'GO:0005488', 'GO:0005509', 'GO:0005539', 'GO:0008201', 'GO:0030246', ...])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'