GO term | GO ID | GO IC |
---|---|---|
nucleic acid binding | GO:0003676 | 1.44 |
cytoskeletal protein binding | GO:0008092 | 3.02 |
organic cyclic compound binding | GO:0097159 | 1.05 |
poly(A) RNA binding | GO:0044822 | 2.69 |
structural molecule activity | GO:0005198 | 3.1 |
actin binding | GO:0003779 | 3.74 |
binding | GO:0005488 | 0.18 |
protein binding | GO:0005515 | 0.46 |
calmodulin binding | GO:0005516 | 4.55 |
heterocyclic compound binding | GO:1901363 | 1.06 |
RNA binding | GO:0003723 | 2.36 |
<type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Fri Apr 26 14:44:12 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
/usr/lib/cgi-bin/gene_disease_db/gene.py in |
475 kegg_ann(gene) |
476 react_ann(gene) |
=> 477 GOBPs,GOCCs=GO_ann(gene) |
478 if make_file==True: |
479 outcsv.close() |
GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'SNTB2' |
/usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='SNTB2') |
345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
346 print '</details>' |
=> 347 return root2GO["biological_process"],root2GO["cellular_component"] |
348 |
349 def kegg_ann(gene): |
root2GO = {'cellular_component': set(['GO:0005737', 'GO:0005856', 'GO:0005874', 'GO:0005912', 'GO:0005924', 'GO:0005925', ...]), 'molecular_function': set(['GO:0003676', 'GO:0003723', 'GO:0003779', 'GO:0005198', 'GO:0005488', 'GO:0005515', ...])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'