| Disease ID | Disease name | Source of annotation with SNX10 | OMIM link | Number of associated genes | genes |
|---|---|---|---|---|---|
| PS259700 | OSTEOPETROSIS, AUTOSOMAL RECESSIVE | ClinVar, OMIM, HUMSAVAR | link to OMIM | 8 | TNFRSF11A, TNFSF11, SNX10, PLEKHM1, CA2, CLCN7, OSTM1, TCIRG1 |
Download the gene annotation in CSV format
| <class 'psycopg2.OperationalError'> | Python 2.7.9: /usr/bin/python Tue Apr 23 08:03:54 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 470 uni=protein_ann(gene) |
| 471 pdb_ann(gene) |
| => 472 band_ann(gene) |
| 473 tandem_ann(gene) |
| 474 TF_ann(gene) |
| band_ann = <function band_ann>, gene = 'SNX10' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in band_ann(gene='SNX10') |
| 161 |
| 162 def band_ann(gene): |
| => 163 band=get_set("SELECT distinct band from gene2ENSG_start_stop where gene=%s",(gene,)) |
| 164 mylist=plist("Cytogenetic band",band) |
| 165 print '<details>' |
| band undefined, global get_set = <function get_set>, gene = 'SNX10' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in get_set(query='SELECT distinct band from gene2ENSG_start_stop where gene=%s', par=('SNX10',)) |
| 22 |
| 23 def get_set(query,par=False): |
| => 24 conn=psycopg2.connect(database=myfile,user='giulia',password='psqlgiulia') |
| 25 c = conn.cursor() |
| 26 if par!=False: |
| global conn = <connection object at 0x7f58d5370e88; dsn: 'dbna...9_11 user=giulia password=xxxxxxxxxx', closed: 0>, global psycopg2 = <module 'psycopg2' from '/usr/lib/python2.7/dist-packages/psycopg2/__init__.pyc'>, psycopg2.connect = <function connect>, database undefined, global myfile = 'mydb29_11', user undefined, password undefined |
| /usr/lib/python2.7/dist-packages/psycopg2/__init__.py in connect(dsn='dbname=mydb29_11 user=giulia password=psqlgiulia', database='mydb29_11', user='giulia', password='psqlgiulia', host=None, port=None, connection_factory=None, cursor_factory=None, async=False, **kwargs={}) |
| 162 for (k, v) in items]) |
| 163 |
| => 164 conn = _connect(dsn, connection_factory=connection_factory, async=async) |
| 165 if cursor_factory is not None: |
| 166 conn.cursor_factory = cursor_factory |
| conn undefined, global _connect = <built-in function _connect>, dsn = 'dbname=mydb29_11 user=giulia password=psqlgiulia', connection_factory = None, async = False |
<class 'psycopg2.OperationalError'>: FATAL: remaining connection slots are reserved for non-replication superuser connections
args =
('FATAL: remaining connection slots are reserved for non-replication superuser connections\n',)
cursor =
None
diag =
<psycopg2._psycopg.Diagnostics object>
message =
'FATAL: remaining connection slots are reserved for non-replication superuser connections\n'
pgcode =
None
pgerror =
None