| Disease ID | Disease name | Source of annotation with SUGCT | OMIM link | Number of associated genes | genes |
|---|---|---|---|---|---|
| 231690 | GLUTARIC ACIDURIA III | ClinVar, OMIM, HUMSAVAR | link to OMIM | 1 | SUGCT |
Download the gene annotation in CSV format
| GO term | GO ID | GO IC |
|---|---|---|
| CoA-transferase activity | GO:0008410 | 8.35 |
| transferase activity | GO:0016740 | 1.95 |
| transferase activity, transferring sulfur-containing groups | GO:0016782 | 5.52 |
| catalytic activity | GO:0003824 | 1.05 |
| succinate-hydroxymethylglutarate CoA-transferase activity | GO:0047369 | 9.74 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Wed Apr 24 19:19:16 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'SUGCT' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='SUGCT') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'cellular_component': set(['GO:0005739', 'GO:0043226', 'GO:0043227', 'GO:0043229', 'GO:0043231', 'GO:0044424', ...]), 'molecular_function': set(['GO:0003824', 'GO:0008410', 'GO:0016740', 'GO:0016782', 'GO:0047369'])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'