| Disease ID | Disease name | Source of annotation with PDE6H | OMIM link | Number of associated genes | genes |
|---|---|---|---|---|---|
| 610024 | RETINAL CONE DYSTROPHY 3A | ClinVar, OMIM | link to OMIM | 1 | PDE6H |
Download the gene annotation in CSV format
| KEGG pathway | KEGG ID | KEGG IC |
|---|---|---|
| Purine metabolism | hsa00230 | 5.28 |
| GO term | GO ID | GO IC |
|---|---|---|
| 3',5'-cyclic-nucleotide phosphodiesterase activity | GO:0004114 | 6.52 |
| cyclic-nucleotide phosphodiesterase activity | GO:0004112 | 6.48 |
| phosphoric ester hydrolase activity | GO:0042578 | 3.82 |
| binding | GO:0005488 | 0.18 |
| enzyme inhibitor activity | GO:0004857 | 3.78 |
| molecular function regulator | GO:0098772 | 2.51 |
| heterocyclic compound binding | GO:1901363 | 1.06 |
| nucleoside phosphate binding | GO:1901265 | 1.96 |
| phosphoric diester hydrolase activity | GO:0008081 | 5.23 |
| nucleotide binding | GO:0000166 | 1.96 |
| guanyl ribonucleotide binding | GO:0032561 | 3.73 |
| purine nucleotide binding | GO:0017076 | 2.19 |
| 3',5'-cyclic-GMP phosphodiesterase activity | GO:0047555 | 7.1 |
| hydrolase activity | GO:0016787 | 1.9 |
| enzyme regulator activity | GO:0030234 | 2.85 |
| hydrolase activity, acting on ester bonds | GO:0016788 | 3.1 |
| small molecule binding | GO:0036094 | 1.89 |
| catalytic activity | GO:0003824 | 1.05 |
| cGMP binding | GO:0030553 | 6.97 |
| cyclic nucleotide binding | GO:0030551 | 6.13 |
| carbohydrate derivative binding | GO:0097367 | 2.03 |
| organic cyclic compound binding | GO:0097159 | 1.05 |
| guanyl nucleotide binding | GO:0019001 | 3.73 |
| protein binding | GO:0005515 | 0.46 |
| purine ribonucleotide binding | GO:0032555 | 2.2 |
| ribonucleotide binding | GO:0032553 | 2.19 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Wed Jan 15 17:02:04 2025 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'PDE6H' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='PDE6H') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'biological_process': set(['GO:0000187', 'GO:0001932', 'GO:0001934', 'GO:0003008', 'GO:0007600', 'GO:0007601', ...]), 'molecular_function': set(['GO:0000166', 'GO:0003824', 'GO:0004112', 'GO:0004114', 'GO:0004857', 'GO:0005488', ...])} |
<type 'exceptions.KeyError'>: 'cellular_component'
args =
('cellular_component',)
message =
'cellular_component'