| Disease ID | Disease name | Source of annotation with LMNB2 | OMIM link | Number of associated genes | genes |
|---|---|---|---|---|---|
| PS254800 | EPILEPSY, PROGRESSIVE MYOCLONIC | ClinVar, OMIM, HUMSAVAR | link to OMIM | 12 | CERS1, PRICKLE1, KCTD7, SCARB2, CSTB, TBC1D24, PRDM8, LMNB2, NHLRC1, KCNC1, GOSR2, EPM2A |
| 608709 | LIPODYSTROPHY, PARTIAL, ACQUIRED, SUSCEPTIBILITY TO | ClinVar, OMIM, HUMSAVAR | link to OMIM | 1 | LMNB2 |
Download the gene annotation in CSV format
| GO term | GO ID | GO IC |
|---|---|---|
| structural molecule activity | GO:0005198 | 3.1 |
| <type 'exceptions.KeyError'> | Python 2.7.9: /usr/bin/python Tue Oct 15 21:35:06 2024 |
A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.
| /usr/lib/cgi-bin/gene_disease_db/gene.py in |
| 475 kegg_ann(gene) |
| 476 react_ann(gene) |
| => 477 GOBPs,GOCCs=GO_ann(gene) |
| 478 if make_file==True: |
| 479 outcsv.close() |
| GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'LMNB2' |
| /usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='LMNB2') |
| 345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>' |
| 346 print '</details>' |
| => 347 return root2GO["biological_process"],root2GO["cellular_component"] |
| 348 |
| 349 def kegg_ann(gene): |
| root2GO = {'cellular_component': set(['GO:0005634', 'GO:0005635', 'GO:0005637', 'GO:0005638', 'GO:0005882', 'GO:0016020', ...]), 'molecular_function': set(['GO:0005198'])} |
<type 'exceptions.KeyError'>: 'biological_process'
args =
('biological_process',)
message =
'biological_process'