Disease table of SARCOMA, SYNOVIAL OMIM ID: 300813

Gene-disease associations table

GeneAssociated with SARCOMA, SYNOVIAL inLink to HGNCCytogenetic bandNumber of associated diseasesAssociated diseases
SSX2OMIMHGNC linkXp11.221300813
SSX1OMIMHGNC linkXp11.231300813

Download the disease annotation in CSV format

Relations among genes:

Tandem repeat annotations from DGD
Cytogenetic band analysis
By band
Shared bandNumber of genes associated with the diseaseGenes associated with the disease
Xp112SSX2, SSX1
By region
Shared regionNumber of genes associated with the diseaseGenes associated with the disease
Xp12SSX2, SSX1
By arm
Shared armNumber of genes associated with the diseaseGenes associated with the disease
Xp2SSX2, SSX1
By chromosome
Shared chromosomeNumber of genes associated with the diseaseGenes associated with the disease
X2SSX2, SSX1
Transcription Factors (TF) annotation from TRRUST
TFassociated to this disease# regulated genesRegulated genes# regulated genes associated with this diseaseRegulated genes associated with this disease
SSX2YES1MMP20
Interactions from BIOGRID - physical
Gene1Gene2Direct InteractionNumber of shared interactorsShared genes in interaction
SSX2SSX1No1MAGEC2

Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)

Interactions from BIOGRID - genetic
Interactions from STRING
Interactions from CORUM
Interactions from CENSUS
Interactions from PDB
Interactions from manually curated literature
KEGG pathways annotation: shared terms / NET-GE enrichment

Shared terms

KEGG termKEGG term IDICNumber of genes with the same termGenes
Transcriptional misregulation in cancerhsa052025.212SSX1, SSX2

NET-GE enrichment

Term New enriched termICP valueGenes
Transcriptional misregulation in cancer (hsa05202) -5.210.003SSX1, SSX2
REACTOME pathways annotation: shared terms / NET-GE enrichment (no shared terms)
GO - molecular function annotation: shared terms (no NET-GE enrichment)

Shared terms

GOICNumber of genes with the same GOGenes
protein binding (GO:0005515) 0.462SSX1, SSX2
organic cyclic compound binding (GO:0097159) 1.052SSX1, SSX2
transcription corepressor activity (GO:0003714) 4.332SSX1, SSX2
transcription cofactor activity (GO:0003712) 3.442SSX1, SSX2
binding (GO:0005488) 0.182SSX1, SSX2
transcription factor activity, transcription factor binding (GO:0000989) 3.362SSX1, SSX2
transcription factor activity, protein binding (GO:0000988) 3.352SSX1, SSX2
heterocyclic compound binding (GO:1901363) 1.062SSX1, SSX2
nucleic acid binding (GO:0003676) 1.442SSX1, SSX2
GO - biological process annotation: shared terms (no NET-GE enrichment)

Shared terms

GOICNumber of genes with the same GOGenes
negative regulation of metabolic process (GO:0009892) 1.932SSX1, SSX2
RNA biosynthetic process (GO:0032774) 1.842SSX1, SSX2
negative regulation of biosynthetic process (GO:0009890) 2.472SSX1, SSX2
negative regulation of cellular biosynthetic process (GO:0031327) 2.492SSX1, SSX2
regulation of cellular biosynthetic process (GO:0031326) 1.382SSX1, SSX2
negative regulation of cellular metabolic process (GO:0031324) 2.012SSX1, SSX2
regulation of cellular metabolic process (GO:0031323) 1.072SSX1, SSX2
nucleic acid metabolic process (GO:0090304) 1.462SSX1, SSX2
cellular biosynthetic process (GO:0044249) 1.372SSX1, SSX2
cellular nitrogen compound metabolic process (GO:0034641) 1.222SSX1, SSX2
nitrogen compound metabolic process (GO:0006807) 1.132SSX1, SSX2
cellular macromolecule biosynthetic process (GO:0034645) 1.662SSX1, SSX2
organic cyclic compound biosynthetic process (GO:1901362) 1.662SSX1, SSX2
regulation of biological process (GO:0050789) 0.452SSX1, SSX2
organic cyclic compound metabolic process (GO:1901360) 1.262SSX1, SSX2
regulation of primary metabolic process (GO:0080090) 1.082SSX1, SSX2
organic substance biosynthetic process (GO:1901576) 1.342SSX1, SSX2
negative regulation of macromolecule metabolic process (GO:0010605) 2.012SSX1, SSX2
regulation of metabolic process (GO:0019222) 1.022SSX1, SSX2
cellular macromolecule metabolic process (GO:0044260) 0.932SSX1, SSX2
regulation of cellular macromolecule biosynthetic process (GO:2000112) 1.462SSX1, SSX2
organic substance metabolic process (GO:0071704) 0.632SSX1, SSX2
biological regulation (GO:0065007) 0.392SSX1, SSX2
nucleic acid-templated transcription (GO:0097659) 1.912SSX1, SSX2
negative regulation of biological process (GO:0048519) 1.332SSX1, SSX2
regulation of gene expression (GO:0010468) 1.372SSX1, SSX2
heterocycle biosynthetic process (GO:0018130) 1.72SSX1, SSX2
negative regulation of nucleobase-containing compound metabolic process (GO:0045934) 2.552SSX1, SSX2
nucleobase-containing compound metabolic process (GO:0006139) 1.352SSX1, SSX2
regulation of macromolecule metabolic process (GO:0060255) 1.082SSX1, SSX2
regulation of biosynthetic process (GO:0009889) 1.372SSX1, SSX2
cellular process (GO:0009987) 0.262SSX1, SSX2
cellular aromatic compound metabolic process (GO:0006725) 1.32SSX1, SSX2
regulation of nucleic acid-templated transcription (GO:1903506) 1.552SSX1, SSX2
negative regulation of nucleic acid-templated transcription (GO:1903507) 2.712SSX1, SSX2
negative regulation of RNA biosynthetic process (GO:1902679) 2.72SSX1, SSX2
biosynthetic process (GO:0009058) 1.322SSX1, SSX2
macromolecule biosynthetic process (GO:0009059) 1.612SSX1, SSX2
regulation of nitrogen compound metabolic process (GO:0051171) 1.362SSX1, SSX2
negative regulation of nitrogen compound metabolic process (GO:0051172) 2.472SSX1, SSX2
regulation of RNA biosynthetic process (GO:2001141) 1.552SSX1, SSX2
nucleobase-containing compound biosynthetic process (GO:0034654) 1.722SSX1, SSX2
regulation of cellular process (GO:0050794) 0.52SSX1, SSX2
metabolic process (GO:0008152) 0.582SSX1, SSX2
heterocycle metabolic process (GO:0046483) 1.312SSX1, SSX2
RNA metabolic process (GO:0016070) 1.592SSX1, SSX2
primary metabolic process (GO:0044238) 0.692SSX1, SSX2
cellular nitrogen compound biosynthetic process (GO:0044271) 1.592SSX1, SSX2
negative regulation of RNA metabolic process (GO:0051253) 2.662SSX1, SSX2
regulation of RNA metabolic process (GO:0051252) 1.522SSX1, SSX2
regulation of nucleobase-containing compound metabolic process (GO:0019219) 1.432SSX1, SSX2
cellular metabolic process (GO:0044237) 0.692SSX1, SSX2
macromolecule metabolic process (GO:0043170) 0.832SSX1, SSX2
regulation of transcription, DNA-templated (GO:0006355) 1.562SSX1, SSX2
regulation of macromolecule biosynthetic process (GO:0010556) 1.432SSX1, SSX2
transcription, DNA-templated (GO:0006351) 1.912SSX1, SSX2
aromatic compound biosynthetic process (GO:0019438) 1.72SSX1, SSX2
negative regulation of macromolecule biosynthetic process (GO:0010558) 2.532SSX1, SSX2
negative regulation of cellular process (GO:0048523) 1.412SSX1, SSX2
GO - cellular component annotation: shared terms (no NET-GE enrichment)

Shared terms

GOICNumber of genes with the same GOGenes
intracellular membrane-bounded organelle (GO:0043231) 0.62SSX1, SSX2
nucleus (GO:0005634) 1.072SSX1, SSX2
cell part (GO:0044464) 0.112SSX1, SSX2
intracellular (GO:0005622) 2.372SSX1, SSX2
intracellular organelle (GO:0043229) 0.512SSX1, SSX2
intracellular part (GO:0044424) 0.282SSX1, SSX2
membrane-bounded organelle (GO:0043227) 0.472SSX1, SSX2
organelle (GO:0043226) 0.42SSX1, SSX2