Gene table of ADGRV1 : adhesion G protein-coupled receptor V1

Gene-disease associations table

Disease ID	Disease name	Source of annotation with ADGRV1	OMIM link	Number of associated genes	genes
PS121210	SEIZURES, FAMILIAL FEBRILE	ClinVar, OMIM	link to OMIM	5	SCN1A, ADGRV1, SCN9A, CPA6, GABRG2
PS276900	USHER SYNDROME	ClinVar, OMIM, HUMSAVAR	link to OMIM	12	WHRN, PCDH15, USH1G, PDZD7, CLRN1, MYO7A, USH1C, ADGRV1, CDH23, CIB2, USH2A, HARS

Associated genes in ENSEMBL

Associated proteins - SwissProt Accession ID

Associated PDB IDs

Cytogenetic Band

Tandem repeats annotation

Transcription regulation as annotated in TRRUST

Associated KEGG pathways

Associated REACTOME pathways

Associated GO terms for Molecular function

--> -->

<type 'exceptions.KeyError'>

Python 2.7.9: /usr/bin/python
Tue Oct 15 22:01:48 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

475 kegg_ann(gene)

476 react_ann(gene)

=> 477 GOBPs,GOCCs=GO_ann(gene)

478 if make_file==True:

479 outcsv.close()

GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'ADGRV1'

345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>'

346 print '</details>'

=> 347 return root2GO["biological_process"],root2GO["cellular_component"]

348

349 def kegg_ann(gene):

root2GO = {}

<type 'exceptions.KeyError'>: 'biological_process'
args = ('biological_process',)
message = 'biological_process'