Gene table of PRPF6 : pre-mRNA processing factor 6

Gene-disease associations table

Disease IDDisease nameSource of annotation with PRPF6OMIM linkNumber of associated genesgenes
PS268000RETINITIS PIGMENTOSAClinVar, OMIM, HUMSAVAR link to OMIM 69PDE6A, MAK, FSCN2, DHDDS, RHO, RP9, CNGA1, CRB1, SLC7A14, BEST1, CERKL, PRPF3, C8orf37, PROM1, TOPORS, PRPH2, PRCD, SNRNP200, IMPG2, PDE6B, IDH3B, RGR, TTC8, GUCA1B, CDHR1, PANK2, RDH12, BBS2, MERTK, RP1L1, NEK2, USH2A, ZNF408, LRAT, C2orf71, MYO7A, KLHL7, IMPDH1, ZNF513, RP1, NR2E3, PDE6G, ROM1, CYGB, ARL6, NRL, RPGR, PRPF4, RP2, IFT172, HGSNAT, TULP1, CNGB1, KIZ, EYS, OFD1, RPE65, PRPF6, FAM161A, RBP3, IFT140, PRPF8, ABCA4, CLRN1, PRPF31, SAG, CA4, CRX, SEMA4A

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Annotation of the gene PRPF6

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST
Associated KEGG pathways
KEGG pathwayKEGG IDKEGG IC
Spliceosomehsa030405.73
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
Gene ExpressionR-HSA-741602.72
mRNA Splicing - Minor PathwayR-HSA-721657.59
mRNA Splicing - Major PathwayR-HSA-721636.15
Processing of Capped Intron-Containing Pre-mRNAR-HSA-722036.1
mRNA SplicingR-HSA-721726.15
Associated GO terms for Molecular function
GO termGO IDGO IC
steroid hormone receptor bindingGO:00352585.32
nucleic acid bindingGO:00036761.44
organic cyclic compound bindingGO:00971591.05
poly(A) RNA bindingGO:00448222.69
nuclear hormone receptor bindingGO:00352574.7
transcription cofactor activityGO:00037123.44
hormone receptor bindingGO:00514274.57
transcription factor activity, transcription factor bindingGO:00009893.36
macromolecular complex bindingGO:00448772.61
bindingGO:00054880.18
protein bindingGO:00055150.46
transcription factor activity, protein bindingGO:00009883.35
ribonucleoprotein complex bindingGO:00430215.15
RNA bindingGO:00037232.36
receptor bindingGO:00051022.43
heterocyclic compound bindingGO:19013631.06
androgen receptor bindingGO:00506816.07
transcription coactivator activityGO:00037134.04