Gene table of GATAD2B : GATA zinc finger domain containing 2B

Gene-disease associations table

Disease IDDisease nameSource of annotation with GATAD2BOMIM linkNumber of associated genesgenes
PS156200MENTAL RETARDATION, AUTOSOMAL DOMINANTClinVar, OMIM link to OMIM 44EHMT1, KANSL1, AHDC1, SOX11, CDH15, KIRREL3, EEF1A2, KAT6A, ZMYND11, ARID1A, KMT2C, PPP2R5D, DYNC1H1, GRIN1, CTCF, SETD5, AUTS2, PACS1, DPP6, MBD5, DEAF1, KIF1A, SYNGAP1, PURA, POGZ, EPB41L1, PPP2R1A, NR1I3, CTNNB1, ARID1B, MYT1L, CACNG2, COL4A3BP, SMARCB1, MEF2C, SMARCE1, SMARCA4, ZBTB18, ADNP, GATAD2B, SETBP1, GRIN2B, CHAMP1, DYRK1A

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Annotation of the gene GATAD2B

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST
Associated KEGG pathways
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
Gene ExpressionR-HSA-741602.72
RNA Polymerase I, RNA Polymerase III, and Mitochondrial TranscriptionR-HSA-5040466.16
Chromatin organizationR-HSA-48397265.19
RNA Polymerase I Transcription InitiationR-HSA-737627.43
RNA Polymerase I TranscriptionR-HSA-738646.72
HDACs deacetylate histonesR-HSA-32148157.08
RNA Polymerase I Promoter ClearanceR-HSA-738546.75
Chromatin modifying enzymesR-HSA-32475095.19
Associated GO terms for Molecular function
GO termGO IDGO IC
RNA polymerase II regulatory region DNA bindingGO:00010123.36
core promoter proximal region DNA bindingGO:00011593.82
enhancer sequence-specific DNA bindingGO:00011585.36
nucleosome bindingGO:00314915.95
chromatin DNA bindingGO:00314905.37
nucleosomal DNA bindingGO:00314926.37
macromolecular complex bindingGO:00448772.61
bindingGO:00054880.18
nucleic acid bindingGO:00036761.44
DNA bindingGO:00036771.92
heterocyclic compound bindingGO:19013631.06
sequence-specific DNA bindingGO:00435652.79
structure-specific DNA bindingGO:00435664.98
sequence-specific double-stranded DNA bindingGO:19908373.2
transition metal ion bindingGO:00469142.48
zinc ion bindingGO:00082702.66
ion bindingGO:00431671.36
protein complex bindingGO:00324033.09
double-stranded DNA bindingGO:00036903.09
metal ion bindingGO:00468721.41
RNA polymerase II distal enhancer sequence-specific DNA bindingGO:00009805.58
cation bindingGO:00431691.4
regulatory region nucleic acid bindingGO:00010673.03
core promoter proximal region sequence-specific DNA bindingGO:00009873.83
enhancer bindingGO:00353265.21
transcription regulatory region DNA bindingGO:00442123.03
transcription factor activity, sequence-specific DNA bindingGO:00037002.65
organic cyclic compound bindingGO:00971591.05
transcription regulatory region sequence-specific DNA bindingGO:00009763.24
RNA polymerase II regulatory region sequence-specific DNA bindingGO:00009773.37
protein bindingGO:00055150.46
regulatory region DNA bindingGO:00009753.03
RNA polymerase II core promoter proximal region sequence-specific DNA bindingGO:00009783.88
chromatin bindingGO:00036823.64
nucleic acid binding transcription factor activityGO:00010712.65