Gene table of VIM : vimentin

Gene-disease associations table

Disease IDDisease nameSource of annotation with VIMOMIM linkNumber of associated genesgenes
PS116200CATARACTClinVar, OMIM, HUMSAVAR link to OMIM 33GCNT2, CRYGD, VIM, CRYBB2, PITX3, UNC45B, BFSP1, GJA8, MAF, AGK, EPHA2, CRYBB3, MIP, CRYBA2, CRYGS, CRYBB1, FYCO1, SIPA1L3, CRYAB, GJA3, BFSP2, TDRD7, HSF4, CHMP4B, CRYAA, LIM2, WFS1, CRYBA4, LSS, CRYBA1, CRYGB, CRYGC, NHS

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Annotation of the gene VIM

Associated genes in ENSEMBL
Associated proteins - SwissProt Accession ID
Associated PDB IDs
Cytogenetic Band
Tandem repeats annotation
Transcription regulation as annotated in TRRUST

It is regulated by the following TF:

Associated KEGG pathways
KEGG pathwayKEGG IDKEGG IC
MicroRNAs in cancerhsa052065.38
Epstein-Barr virus infectionhsa051694.97
Associated REACTOME pathways
REACTOME pathwayREACTOME IDREACTOME IC
Caspase-mediated cleavage of cytoskeletal proteinsR-HSA-2648709.4
Apoptotic cleavage of cellular proteinsR-HSA-1114657.73
Apoptotic execution phaseR-HSA-751537.28
Muscle contractionR-HSA-3970146.96
Programmed Cell DeathR-HSA-53578015.65
Striated Muscle ContractionR-HSA-3905227.81
ApoptosisR-HSA-1095815.68
Associated GO terms for Molecular function
GO termGO IDGO IC
glycoprotein bindingGO:00019485.11
protein C-terminus bindingGO:00080224.5
structural constituent of cytoskeletonGO:00052005.12
intermediate filament bindingGO:00192157.1
nucleic acid bindingGO:00036761.44
carbohydrate derivative bindingGO:00973672.03
organic cyclic compound bindingGO:00971591.05
structural constituent of eye lensGO:00052126.74
structural molecule activityGO:00051983.1
double-stranded RNA bindingGO:00037255.58
macromolecular complex bindingGO:00448772.61
bindingGO:00054880.18
protein bindingGO:00055150.46
protein complex bindingGO:00324033.09
scaffold protein bindingGO:00971105.93
keratin filament bindingGO:19902548.13
heterocyclic compound bindingGO:19013631.06
identical protein bindingGO:00428022.63
RNA bindingGO:00037232.36