Gene table of GYPC : glycophorin C (Gerbich blood group)

Gene-disease associations table

Disease ID	Disease name	Source of annotation with GYPC	OMIM link	Number of associated genes	genes
616089	BLOOD GROUP, GERBICH SYSTEM	OMIM	link to OMIM	1	GYPC
611162	MALARIA, SUSCEPTIBILITY TO	OMIM	link to OMIM	16	FCGR2A, TIRAP, ICAM1, ACKR1, G6PD, GYPC, TNF, SLC4A1, NOS2, HBB, CISH, GYPB, FCGR2B, CR1, CD36, GYPA

Download the gene annotation in CSV format

Annotation of the gene GYPC

Associated genes in ENSEMBL

ENSG00000136732

Associated proteins - SwissProt Accession ID

P04921

Associated PDB IDs

2ejy

Cytogenetic Band

2q14.3

Tandem repeats annotation

Transcription regulation as annotated in TRRUST

Associated KEGG pathways

KEGG pathway	KEGG ID	KEGG IC
Malaria	hsa05144	7.15

Associated REACTOME pathways

Associated GO terms for Molecular function

GO term	GO ID	GO IC
oligosaccharide binding	GO:0070492	7.44
binding	GO:0005488	0.18
protein binding	GO:0005515	0.46
carbohydrate binding	GO:0030246	4.17

--> -->

<type 'exceptions.KeyError'>

Python 2.7.9: /usr/bin/python
Sun Apr 28 21:24:06 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

/usr/lib/cgi-bin/gene_disease_db/gene.py in ()

475 kegg_ann(gene)

476 react_ann(gene)

=> 477 GOBPs,GOCCs=GO_ann(gene)

478 if make_file==True:

479 outcsv.close()

GOBPs undefined, GOCCs undefined, GO_ann = <function GO_ann>, gene = 'GYPC'

/usr/lib/cgi-bin/gene_disease_db/gene.py in GO_ann(gene='GYPC')

345 print '<summary id="missing"> Associated GO terms for '+root2root_names[root]+' </summary>'

346 print '</details>'

=> 347 return root2GO["biological_process"],root2GO["cellular_component"]

348

349 def kegg_ann(gene):

root2GO = {'cellular_component': set(['GO:0005856', 'GO:0005886', 'GO:0005887', 'GO:0016020', 'GO:0016021', 'GO:0030863', ...]), 'molecular_function': set(['GO:0005488', 'GO:0005515', 'GO:0030246', 'GO:0070492'])}

<type 'exceptions.KeyError'>: 'biological_process'
args = ('biological_process',)
message = 'biological_process'