Gene | Associated with LEBER OPTIC ATROPHY AND DYSTONIA in | Link to HGNC | Cytogenetic band | Number of associated diseases | Associated diseases |
---|---|---|---|---|---|
MT-ND1 | OMIM | HGNC link | MT | 6 | 500008, 535000, 540000, 500001, 502500, 252010 |
MT-ND3 | OMIM | HGNC link | MT | 3 | 256000, 252010, 500001 |
MT-ND4 | OMIM, HUMSAVAR | HGNC link | MT | 3 | 540000, 500001, 535000 |
MT-ND6 | OMIM, HUMSAVAR | HGNC link | MT | 5 | 535000, 553000, 540000, 252010, 500001 |
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Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)
Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)
KEGG term | KEGG term ID | IC | Number of genes with the same term | Genes |
---|---|---|---|---|
Metabolic pathways | hsa01100 | 2.49 | 4 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Oxidative phosphorylation | hsa00190 | 5.69 | 4 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Parkinson's disease | hsa05012 | 5.59 | 4 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
Neurodegenerative diseases | NEW | 4.27 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Global and overview maps | NEW | 2.47 | 0.01 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Metabolism | NEW | 2.06 | 0.03 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Oxidative phosphorylation (hsa00190) | - | 5.69 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Metabolic pathways (hsa01100) | - | 2.49 | 0.009 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Energy metabolism | NEW | 5.42 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Parkinson's disease (hsa05012) | - | 5.59 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
REACTOME term | REACTOME term ID | IC | Number of genes with the same term | Genes |
---|---|---|---|---|
The citric acid (TCA) cycle and respiratory electron transport | R-HSA-1428517 | 5.71 | 4 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Respiratory electron transport | R-HSA-611105 | 6.44 | 4 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. | R-HSA-163200 | 6.12 | 4 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Metabolism | R-HSA-1430728 | 2.34 | 4 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
Metabolism (R-HSA-1430728) | - | 2.34 | 0.008 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
The citric acid (TCA) cycle and respiratory electron transport (R-HSA-1428517) | - | 5.71 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Respiratory electron transport (R-HSA-611105) | - | 6.44 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. (R-HSA-163200) | - | 6.12 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
NADH dehydrogenase (ubiquinone) activity (GO:0008137) | - | 5.93 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (GO:0016655) | - | 5.66 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
oxidoreductase activity, acting on NAD(P)H (GO:0016651) | - | 5.13 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
oxidoreductase activity (GO:0016491) | - | 3.12 | 0.001 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
NADH dehydrogenase activity (GO:0003954) | - | 5.93 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
NADH dehydrogenase (quinone) activity (GO:0050136) | - | 5.93 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
mitochondrial electron transport, NADH to ubiquinone (GO:0006120) | - | 5.84 | 0.0 | MT-ND4, MT-ND3, MT-ND1 |
electron transport chain (GO:0022900) | - | 5.09 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
small molecule metabolic process (GO:0044281) | NEW | 2.38 | 0.007 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
respiratory electron transport chain (GO:0022904) | - | 5.11 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
generation of precursor metabolites and energy (GO:0006091) | - | 4.07 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
oxidation-reduction process (GO:0055114) | - | 2.91 | 0.014 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
respiratory chain complex I (GO:0045271) | - | 5.91 | 0.0 | MT-ND4, MT-ND3, MT-ND1 |
catalytic complex (GO:1902494) | - | 2.9 | 0.006 | MT-ND4, MT-ND3, MT-ND1 |
NADH dehydrogenase complex (GO:0030964) | - | 5.91 | 0.0 | MT-ND4, MT-ND3, MT-ND1 |
organelle inner membrane (GO:0019866) | - | 3.56 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
organelle membrane (GO:0031090) | - | 1.97 | 0.008 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
mitochondrial membrane (GO:0031966) | - | 3.31 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
mitochondrial membrane part (GO:0044455) | - | 4.54 | 0.0 | MT-ND4, MT-ND3, MT-ND1 |
mitochondrial inner membrane (GO:0005743) | - | 3.65 | 0.0 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
mitochondrial part (GO:0044429) | - | 2.92 | 0.002 | MT-ND6, MT-ND4, MT-ND3, MT-ND1 |
oxidoreductase complex (GO:1990204) | - | 5.19 | 0.0 | MT-ND4, MT-ND3, MT-ND1 |
mitochondrial respiratory chain complex I (GO:0005747) | - | 5.91 | 0.0 | MT-ND4, MT-ND3, MT-ND1 |