Gene | Associated with HEMORRHAGE, INTRACEREBRAL, SUSCEPTIBILITY TO in | Link to HGNC | Cytogenetic band | Number of associated diseases | Associated diseases |
---|---|---|---|---|---|
COL4A1 | ClinVar, OMIM, HUMSAVAR | HGNC link | 13q34 | 6 | 611773, 269160, PS175780, 607595, 614519, 180000 |
ACE | OMIM | HGNC link | 17q23.3 | 5 | PS603933, 608446, 267430, 614519, 104300 |
COL4A2 | ClinVar, OMIM | HGNC link | 13q34 | 2 | PS175780, 614519 |
Download the disease annotation in CSV format
Common tandem group | Number of genes in this tandem group associated to this disease | Genes in this tandem group associated to this disease |
---|---|---|
Group 606 | 2 | COL4A2, COL4A1 |
Shared sub_band | Number of genes associated with the disease | Genes associated with the disease |
---|---|---|
13q34 | 2 | COL4A2, COL4A1 |
Shared band | Number of genes associated with the disease | Genes associated with the disease |
---|---|---|
13q34 | 2 | COL4A2, COL4A1 |
Shared region | Number of genes associated with the disease | Genes associated with the disease |
---|---|---|
13q3 | 2 | COL4A2, COL4A1 |
regulated gene | associated to this disease | # TFs | TFs | # TFs associated with this disease | TFs associated with this disease |
---|---|---|---|---|---|
COL4A1 | YES | 1 | LMX1B | 0 | |
ACE | YES | 4 | SP3, HIF1A, CREM, EGR1 | 0 |
Gene1 | Gene2 | Direct Interaction | Number of shared interactors | Shared genes in interaction |
---|---|---|---|---|
COL4A1 | COL4A2 | Yes | 3 | VHL, COL4A2, COL4A1 |
Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)
Gene1 | Gene2 | Direct Interaction | Interaction mode | Number of shared interactors | Shared genes in interaction |
---|---|---|---|---|---|
COL4A1 | COL4A2 | Yes | binding | 60 | COL24A1, COL8A1, COL14A1, BMP4, ITGB6, COL6A1, ITGA2B, COL11A1, COL4A5, COL10A1, COL9A2, ITGA11, ITGA9, COL25A1, ITGA6, ITGA5, COL21A1, SDC1, PTK2, COL19A1, COL20A1, CD44, COL23A1, ITGB5, COL12A1, ITGAV, ITGA4, COL15A1, COL7A1, COL13A1, COL28A1, ITGA3, ITGA7, COL5A3, COL27A1, SDC4, COL16A1, ITGB7, ITGB4, ALPL, ITGA2, COL22A1, COL6A2, ITGB8, ITGB1, ITGA8, COL9A1, COL9A3, COL2A1, COL17A1, COL4A6, IBSP, ITGA1, COL8A2, COL6A3, ENPP1, COL18A1, BMP2, COL5A1, COL5A2 |
Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)
Gene1 | Gene2 | Interaction | Number of common interactors | Common genes in interaction |
---|---|---|---|---|
COL4A1 | COL4A2 | Yes | 2 | COL4A2, COL4A1 |
Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)
KEGG term | KEGG term ID | IC | Number of genes with the same term | Genes |
---|---|---|---|---|
Protein digestion and absorption | hsa04974 | 6.2 | 2 | COL4A2, COL4A1 |
Pathways in cancer | hsa05200 | 3.98 | 2 | COL4A2, COL4A1 |
ECM-receptor interaction | hsa04512 | 6.09 | 2 | COL4A2, COL4A1 |
Small cell lung cancer | hsa05222 | 6.17 | 2 | COL4A2, COL4A1 |
Focal adhesion | hsa04510 | 4.92 | 2 | COL4A2, COL4A1 |
Amoebiasis | hsa05146 | 5.82 | 2 | COL4A2, COL4A1 |
PI3K-Akt signaling pathway | hsa04151 | 4.21 | 2 | COL4A2, COL4A1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
Protein digestion and absorption (hsa04974) | - | 6.2 | 0.035 | COL4A2, COL4A1 |
Infectious diseases: Parasitic | NEW | 4.46 | 0.022 | COL4A1, COL4A2, ACE |
Amoebiasis (hsa05146) | - | 5.82 | 0.022 | COL4A2, COL4A1 |
Small cell lung cancer (hsa05222) | - | 6.17 | 0.039 | COL4A2, COL4A1 |
Focal adhesion (hsa04510) | - | 4.92 | 0.004 | COL4A1, COL4A2, ACE |
ECM-receptor interaction (hsa04512) | - | 6.09 | 0.03 | COL4A2, COL4A1 |
REACTOME term | REACTOME term ID | IC | Number of genes with the same term | Genes |
---|---|---|---|---|
Integrin cell surface interactions | R-HSA-216083 | 6.57 | 2 | COL4A2, COL4A1 |
Binding and Uptake of Ligands by Scavenger Receptors | R-HSA-2173782 | 5.38 | 2 | COL4A2, COL4A1 |
Assembly of collagen fibrils and other multimeric structures | R-HSA-2022090 | 7.2 | 2 | COL4A2, COL4A1 |
Laminin interactions | R-HSA-3000157 | 8.08 | 2 | COL4A2, COL4A1 |
Scavenging by Class A Receptors | R-HSA-3000480 | 8.73 | 2 | COL4A2, COL4A1 |
Anchoring fibril formation | R-HSA-2214320 | 9.08 | 2 | COL4A2, COL4A1 |
Degradation of the extracellular matrix | R-HSA-1474228 | 6.11 | 2 | COL4A2, COL4A1 |
Collagen degradation | R-HSA-1442490 | 7.03 | 2 | COL4A2, COL4A1 |
ECM proteoglycans | R-HSA-3000178 | 6.75 | 2 | COL4A2, COL4A1 |
NCAM signaling for neurite out-growth | R-HSA-375165 | 4.9 | 2 | COL4A2, COL4A1 |
NCAM1 interactions | R-HSA-419037 | 7.59 | 2 | COL4A2, COL4A1 |
Extracellular matrix organization | R-HSA-1474244 | 4.91 | 2 | COL4A2, COL4A1 |
Collagen formation | R-HSA-1474290 | 6.56 | 2 | COL4A2, COL4A1 |
Signal Transduction | R-HSA-162582 | 1.78 | 2 | COL4A2, COL4A1 |
Signaling by PDGF | R-HSA-186797 | 4.53 | 2 | COL4A2, COL4A1 |
Non-integrin membrane-ECM interactions | R-HSA-3000171 | 7.1 | 2 | COL4A2, COL4A1 |
Collagen biosynthesis and modifying enzymes | R-HSA-1650814 | 6.98 | 2 | COL4A2, COL4A1 |
Axon guidance | R-HSA-422475 | 3.93 | 2 | COL4A2, COL4A1 |
Developmental Biology | R-HSA-1266738 | 3.48 | 2 | COL4A2, COL4A1 |
Vesicle-mediated transport | R-HSA-5653656 | 4.33 | 2 | COL4A2, COL4A1 |
GO | IC | Number of genes with the same GO | Genes |
---|---|---|---|
binding (GO:0005488) | 0.18 | 3 | COL4A2, COL4A1, ACE |
protein binding (GO:0005515) | 0.46 | 3 | COL4A1, COL4A2, ACE |
extracellular matrix structural constituent (GO:0005201) | 5.37 | 2 | COL4A2, COL4A1 |
structural molecule activity (GO:0005198) | 3.1 | 2 | COL4A2, COL4A1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
extracellular matrix structural constituent (GO:0005201) | - | 5.37 | 0.02 | COL4A2, COL4A1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
collagen catabolic process (GO:0030574) | - | 5.57 | 0.008 | COL4A2, COL4A1 |
multicellular organismal metabolic process (GO:0044236) | - | 5.2 | 0.001 | COL4A1, COL4A2, ACE |
multicellular organismal macromolecule metabolic process (GO:0044259) | - | 5.36 | 0.0 | COL4A1, COL4A2, ACE |
collagen metabolic process (GO:0032963) | - | 5.42 | 0.011 | COL4A2, COL4A1 |
multicellular organismal catabolic process (GO:0044243) | - | 5.47 | 0.0 | COL4A1, COL4A2, ACE |
extracellular matrix disassembly (GO:0022617) | NEW | 5.38 | 0.021 | COL4A2, COL4A1 |
Term | New enriched term | IC | P value | Genes |
---|---|---|---|---|
collagen type IV trimer (GO:0005587) | - | 8.01 | 0.0 | COL4A2, COL4A1 |
collagen trimer (GO:0005581) | - | 5.21 | 0.003 | COL4A2, COL4A1 |
endoplasmic reticulum lumen (GO:0005788) | - | 4.5 | 0.011 | COL4A2, COL4A1 |
extracellular matrix (GO:0031012) | - | 3.81 | 0.031 | COL4A2, COL4A1 |
basement membrane (GO:0005604) | - | 5.34 | 0.018 | COL4A2, COL4A1 |
extracellular region (GO:0005576) | - | 2.18 | 0.024 | COL4A2, COL4A1, ACE |
basement membrane collagen trimer (GO:0098651) | - | 7.72 | 0.0 | COL4A2, COL4A1 |
extracellular matrix part (GO:0044420) | - | 4.97 | 0.006 | COL4A2, COL4A1 |
network-forming collagen trimer (GO:0098642) | - | 7.86 | 0.0 | COL4A2, COL4A1 |