Disease table of RHABDOID TUMOR PREDISPOSITION SYNDROME OMIM ID: PS609322

Gene-disease associations table

GeneAssociated with RHABDOID TUMOR PREDISPOSITION SYNDROME inLink to HGNCCytogenetic bandNumber of associated diseasesAssociated diseases
SMARCB1ClinVar, OMIMHGNC link22q11.234PS156200, PS609322, PS135900, PS162091
SMARCA4ClinVar, OMIMHGNC link19p13.23PS156200, PS135900, PS609322

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Relations among genes:

Tandem repeat annotations from DGD
Cytogenetic band analysis
Transcription Factors (TF) annotation from TRRUST
TFassociated to this disease# regulated genesRegulated genes# regulated genes associated with this diseaseRegulated genes associated with this disease
SMARCB1YES2CD44, CDKN2A0
SMARCA4YES9CDKN1A, CCND1, CDH1, CD44, CAD, MECOM, CDKN2A, FOS, ABCG20
regulated geneassociated to this disease# TFsTFs # TFs associated with this diseaseTFs associated with this disease
SMARCB1YES1PARP10
CDKN2ANO24FOXM1, EAPP, ETS2, EZH2, DNMT3A, HDAC9, ZBTB7A, SP1, HDAC3, MTA1, DNMT1, TBX2, E2F1, SMARCB1, TBX3, ZNF148, HDAC1, HDAC4, ETS1, SMARCA1, TBX5, SMARCA4, SP3, JUNB2SMARCB1, SMARCA4
CD44NO12SP1, SMARCA1, TWIST2, SMARCA4, HDAC1, SNAI2, TWIST1, IKBKB, HMGA1, CTNNB1, SMARCB1, MYCN2SMARCB1, SMARCA4
Interactions from BIOGRID - physical
Gene1Gene2Direct InteractionNumber of shared interactorsShared genes in interaction
SMARCB1SMARCA4Yes56CHFR, KLF1, TP53, RPS6KA5, SS18, DPF2, SMARCAD1, TAT, HDAC1, ARID1A, NCOR1, SMARCD2, CARM1, DPF3, ARID1B, RUNX1, TOP2B, PBRM1, MCPH1, NONO, SMARCE1, CDK8, SMARCC2, COPS5, RELB, CDYL, BRCA1, ACTL6A, PHF10, SMARCD3, BCL7B, DPF1, HSF1, PRMT5, SMARCB1, SIN3A, BCL7C, NFATC1, GATA1, EPAS1, CCNE1, ARID2, SMARCD1, SMARCC1, SMARCA2, BCL7A, HDAC2, CAND1, CEBPB, POLR2A, SIN3B, CDX2, MYC, RBBP4, CUL3, ING1

Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)

Interactions from BIOGRID - genetic
Interactions from STRING
Gene1Gene2Direct InteractionInteraction modeNumber of shared interactorsShared genes in interaction
SMARCB1SMARCA4Yesactivation, binding63KAT2B, KAT2A, IRF5, GTF2B, SMARCC2, KLF1, IRF2, TP53, GTF2A1, GTF3A, ARID1A, XPC, PHF7, YEATS4, SMARCD2, RAD52, ESR2, DPF3, CCND1, PBRM1, POLR2A, IRF7, SMARCE1, ZNF14, DPF1, BRCA1, ACTL6A, PHF10, SMARCC1, CDKN1A, IFNB1, SMARCD3, GTF2E1, ACTL6B, HDAC1, SIN3A, SMARCA2, ATF2, UBC, JUN, ARID1B, RELA, ASH1L, ARID2, MYC, SMARCD1, SMARCA1, CREBBP, HMGB1, IRF4, NR3C1, RBBP4, IRF6, HDAC2, MYSM1, CEBPB, RB1, GTF2F1, PHF11, JUNB, MLLT1, IRF1, IRF3

Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)

Interactions from CORUM
Gene1Gene2Direct InteractionComplexesNumber of shared interactorsShared genes in interaction
SMARCB1SMARCA4YesSWI-SNF chromatin remodeling-related-BRCA1 complex;EBAFa complex;PBAF complex (Polybromo- and BAF containing complex);NUMAC complex (nucleosomal methylation activator complex);SIN3-ING1b complex II;WINAC complex;ETS2-SMARCA4-INI1 complex;EBAFb complex;RNA polymerase II complex, chromatin structure modifying;Brg1-associated complex I;BRG1-associated complex;Brg1-associated complex II;BRG1-SIN3A complex;NCOR1 complex;BAF complex;p300-CBP-p270-SWI/SNF complex;BRG1-SIN3A-HDAC containing SWI/SNF remodeling complex I;LARC complex (LCR-associated remodeling complex)64KAT2B, HNRNPC, MBD2, GTF2B, RBBP4, TBP, HDAC2, ACTL6A, TRIM28, ETS2, ING1, PRMT5, RBBP7, ARID1A, NCOR1, SMARCD2, CARM1, CCNC, ARID2, GTF2H1, PBRM1, SMARCC2, DPF2, SMARCE1, CDK8, HDAC3, TOP2B, CHAF1A, BAZ1B, BRCA1, HDAC1, GTF2F1, MBD3, ACTL6B, SMARCD3, ARID1B, GTF2E1, VDR, SIN3A, CHD4, ACTG1, ARID4B, SUPT16H, DRAP1, SAP30, MTA2, ERCC3, SRCAP, SF3B3, SMARCC1, SMARCA2, EP300, POLR2A, SF3A1, SMARCD1, CREBBP, SCYL1, ACTB, GATAD2B, MED21, PCSK4, SAP18, MLLT1, GTF2H3

Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)

Interactions from CENSUS
Gene1Gene2Direct InteractionNumber of shared interactorsShared genes in interaction
SMARCB1SMARCA4Yes11SMARCC1, SMARCE1, SMARCA2, SMARCD1, TOP2B, SMARCD2, SMARCC2, PHF10, SMARCD3, ARID1A, ARID1B

Direct interactions graph
Interactions graph (direct and indirect interactions, when direct are not available)

Interactions from PDB
Interactions from manually curated literature
KEGG pathways annotation: NET-GE enrichment (no shared terms)

NET-GE enrichment

Term New enriched termICP valueGenes
Systemic lupus erythematosus (hsa05322) NEW5.950.029SMARCB1, SMARCA4
Natural killer cell mediated cytotoxicity (hsa04650) NEW5.530.048SMARCB1, SMARCA4
Antigen processing and presentation (hsa04612) NEW6.040.015SMARCB1, SMARCA4
REACTOME pathways annotation: shared terms / NET-GE enrichment

Shared terms

REACTOME termREACTOME term IDICNumber of genes with the same termGenes
RMTs methylate histone argininesR-HSA-32148587.492SMARCB1, SMARCA4
Chromatin organizationR-HSA-48397265.192SMARCB1, SMARCA4
Chromatin modifying enzymesR-HSA-32475095.192SMARCB1, SMARCA4

NET-GE enrichment

Term New enriched termICP valueGenes
Circadian Clock (R-HSA-400253) NEW7.030.011SMARCB1, SMARCA4
Mitochondrial biogenesis (R-HSA-1592230) NEW7.340.01SMARCB1, SMARCA4
Chromatin organization (R-HSA-4839726) -5.190.006SMARCB1, SMARCA4
RMTs methylate histone arginines (R-HSA-3214858) -7.490.0SMARCB1, SMARCA4
Chromatin modifying enzymes (R-HSA-3247509) -5.190.006SMARCB1, SMARCA4
Mitotic Prophase (R-HSA-68875) NEW6.270.022SMARCB1, SMARCA4
GO - molecular function annotation: shared terms / NET-GE enrichment

Shared terms

GOICNumber of genes with the same GOGenes
RNA polymerase II regulatory region DNA binding (GO:0001012) 3.362SMARCB1, SMARCA4
RNA polymerase I regulatory region DNA binding (GO:0001013) 7.542SMARCB1, SMARCA4
core promoter proximal region DNA binding (GO:0001159) 3.822SMARCB1, SMARCA4
enhancer sequence-specific DNA binding (GO:0001158) 5.362SMARCB1, SMARCA4
nucleosome binding (GO:0031491) 5.952SMARCB1, SMARCA4
chromatin DNA binding (GO:0031490) 5.372SMARCB1, SMARCA4
nucleosomal DNA binding (GO:0031492) 6.372SMARCB1, SMARCA4
macromolecular complex binding (GO:0044877) 2.612SMARCB1, SMARCA4
binding (GO:0005488) 0.182SMARCB1, SMARCA4
nucleic acid binding (GO:0003676) 1.442SMARCB1, SMARCA4
DNA binding (GO:0003677) 1.922SMARCB1, SMARCA4
heterocyclic compound binding (GO:1901363) 1.062SMARCB1, SMARCA4
Tat protein binding (GO:0030957) 7.662SMARCB1, SMARCA4
sequence-specific DNA binding (GO:0043565) 2.792SMARCB1, SMARCA4
structure-specific DNA binding (GO:0043566) 4.982SMARCB1, SMARCA4
sequence-specific double-stranded DNA binding (GO:1990837) 3.22SMARCB1, SMARCA4
transcription coactivator activity (GO:0003713) 4.042SMARCB1, SMARCA4
transcription cofactor activity (GO:0003712) 3.442SMARCB1, SMARCA4
transcription factor activity, transcription factor binding (GO:0000989) 3.362SMARCB1, SMARCA4
transcription factor activity, protein binding (GO:0000988) 3.352SMARCB1, SMARCA4
core promoter proximal region sequence-specific DNA binding (GO:0000987) 3.832SMARCB1, SMARCA4
double-stranded DNA binding (GO:0003690) 3.092SMARCB1, SMARCA4
transcription factor binding (GO:0008134) 3.462SMARCB1, SMARCA4
RNA polymerase II distal enhancer sequence-specific DNA binding (GO:0000980) 5.582SMARCB1, SMARCA4
RNA polymerase I CORE element sequence-specific DNA binding (GO:0001164) 7.662SMARCB1, SMARCA4
regulatory region nucleic acid binding (GO:0001067) 3.032SMARCB1, SMARCA4
RNA polymerase I regulatory region sequence-specific DNA binding (GO:0001163) 7.662SMARCB1, SMARCA4
protein complex binding (GO:0032403) 3.092SMARCB1, SMARCA4
enhancer binding (GO:0035326) 5.212SMARCB1, SMARCA4
core promoter binding (GO:0001047) 4.712SMARCB1, SMARCA4
core promoter sequence-specific DNA binding (GO:0001046) 5.122SMARCB1, SMARCA4
transcription regulatory region DNA binding (GO:0044212) 3.032SMARCB1, SMARCA4
organic cyclic compound binding (GO:0097159) 1.052SMARCB1, SMARCA4
transcription regulatory region sequence-specific DNA binding (GO:0000976) 3.242SMARCB1, SMARCA4
RNA polymerase II regulatory region sequence-specific DNA binding (GO:0000977) 3.372SMARCB1, SMARCA4
protein binding (GO:0005515) 0.462SMARCB1, SMARCA4
regulatory region DNA binding (GO:0000975) 3.032SMARCB1, SMARCA4
RNA polymerase II core promoter proximal region sequence-specific DNA binding (GO:0000978) 3.882SMARCB1, SMARCA4
chromatin binding (GO:0003682) 3.642SMARCB1, SMARCA4
p53 binding (GO:0002039) 5.532SMARCB1, SMARCA4

NET-GE enrichment

Term New enriched termICP valueGenes
Tat protein binding (GO:0030957) -7.660.0SMARCB1, SMARCA4
transcription factor binding (GO:0008134) -3.460.035SMARCB1, SMARCA4
transcription coactivator activity (GO:0003713) -4.040.013SMARCB1, SMARCA4
transcription cofactor activity (GO:0003712) -3.440.043SMARCB1, SMARCA4
transcription factor binding transcription factor activity (GO:0000989) -3.360.048SMARCB1, SMARCA4
protein binding transcription factor activity (GO:0000988) -3.350.049SMARCB1, SMARCA4
p53 binding (GO:0002039) -5.530.006SMARCB1, SMARCA4
GO - biological process annotation: shared terms / NET-GE enrichment

Shared terms

GOICNumber of genes with the same GOGenes
regulation of primary metabolic process (GO:0080090) 1.082SMARCB1, SMARCA4
regulation of metabolic process (GO:0019222) 1.022SMARCB1, SMARCA4
positive regulation of response to stimulus (GO:0048584) 2.182SMARCB1, SMARCA4
regulation of response to stimulus (GO:0048583) 1.542SMARCB1, SMARCA4
positive regulation of homeostatic process (GO:0032846) 4.382SMARCB1, SMARCA4
regulation of homeostatic process (GO:0032844) 3.652SMARCB1, SMARCA4
organic cyclic compound biosynthetic process (GO:1901362) 1.662SMARCB1, SMARCA4
cellular component organization or biogenesis (GO:0071840) 1.222SMARCB1, SMARCA4
negative regulation of macromolecule metabolic process (GO:0010605) 2.012SMARCB1, SMARCA4
positive regulation of macromolecule metabolic process (GO:0010604) 1.812SMARCB1, SMARCA4
regulation of signal transduction (GO:0009966) 1.842SMARCB1, SMARCA4
cellular developmental process (GO:0048869) 1.822SMARCB1, SMARCA4
ATP-dependent chromatin remodeling (GO:0043044) 5.62SMARCB1, SMARCA4
interspecies interaction between organisms (GO:0044419) 3.082SMARCB1, SMARCA4
modification of morphology or physiology of other organism involved in symbiotic interaction (GO:0051817) 5.272SMARCB1, SMARCA4
positive regulation of molecular function (GO:0044093) 2.232SMARCB1, SMARCA4
positive regulation of biological process (GO:0048518) 1.22SMARCB1, SMARCA4
negative regulation of biological process (GO:0048519) 1.332SMARCB1, SMARCA4
heterocycle metabolic process (GO:0046483) 1.312SMARCB1, SMARCA4
regulation of macromolecule metabolic process (GO:0060255) 1.082SMARCB1, SMARCA4
regulation of RNA biosynthetic process (GO:2001141) 1.552SMARCB1, SMARCA4
interaction with symbiont (GO:0051702) 5.762SMARCB1, SMARCA4
regulation of glucose mediated signaling pathway (GO:1902659) 8.342SMARCB1, SMARCA4
multi-organism process (GO:0051704) 2.652SMARCB1, SMARCA4
aromatic compound biosynthetic process (GO:0019438) 1.72SMARCB1, SMARCA4
chromatin modification (GO:0016568) 4.062SMARCB1, SMARCA4
negative regulation of metabolic process (GO:0009892) 1.932SMARCB1, SMARCA4
positive regulation of metabolic process (GO:0009893) 1.742SMARCB1, SMARCA4
positive regulation of biosynthetic process (GO:0009891) 2.292SMARCB1, SMARCA4
positive regulation of gene expression (GO:0010628) 2.352SMARCB1, SMARCA4
nitrogen compound metabolic process (GO:0006807) 1.132SMARCB1, SMARCA4
positive regulation of viral transcription (GO:0050434) 6.072SMARCB1, SMARCA4
regulation of biological process (GO:0050789) 0.452SMARCB1, SMARCA4
nucleic acid-templated transcription (GO:0097659) 1.912SMARCB1, SMARCA4
organic substance biosynthetic process (GO:1901576) 1.342SMARCB1, SMARCA4
cellular macromolecule metabolic process (GO:0044260) 0.932SMARCB1, SMARCA4
cellular component organization (GO:0016043) 1.242SMARCB1, SMARCA4
biological regulation (GO:0065007) 0.392SMARCB1, SMARCA4
organic cyclic compound metabolic process (GO:1901360) 1.262SMARCB1, SMARCA4
regulation of molecular function (GO:0065009) 1.782SMARCB1, SMARCA4
regulation of biological quality (GO:0065008) 1.682SMARCB1, SMARCA4
heterocycle biosynthetic process (GO:0018130) 1.72SMARCB1, SMARCA4
regulation of viral process (GO:0050792) 3.892SMARCB1, SMARCA4
regulation of biosynthetic process (GO:0009889) 1.372SMARCB1, SMARCA4
regulation of cellular process (GO:0050794) 0.52SMARCB1, SMARCA4
positive regulation of multi-organism process (GO:0043902) 4.682SMARCB1, SMARCA4
regulation of symbiosis, encompassing mutualism through parasitism (GO:0043903) 3.822SMARCB1, SMARCA4
regulation of multi-organism process (GO:0043900) 3.62SMARCB1, SMARCA4
metabolic process (GO:0008152) 0.582SMARCB1, SMARCA4
nucleobase-containing compound biosynthetic process (GO:0034654) 1.722SMARCB1, SMARCA4
RNA metabolic process (GO:0016070) 1.592SMARCB1, SMARCA4
modulation of transcription in other organism involved in symbiotic interaction (GO:0052312) 6.642SMARCB1, SMARCA4
cellular nitrogen compound biosynthetic process (GO:0044271) 1.592SMARCB1, SMARCA4
regulation of transcription, DNA-templated (GO:0006355) 1.562SMARCB1, SMARCA4
positive regulation of macromolecule biosynthetic process (GO:0010557) 2.392SMARCB1, SMARCA4
regulation of macromolecule biosynthetic process (GO:0010556) 1.432SMARCB1, SMARCA4
transcription, DNA-templated (GO:0006351) 1.912SMARCB1, SMARCA4
positive regulation of signal transduction (GO:0009967) 2.52SMARCB1, SMARCA4
cellular component disassembly (GO:0022411) 3.522SMARCB1, SMARCA4
nucleosome organization (GO:0034728) 4.792SMARCB1, SMARCA4
RNA biosynthetic process (GO:0032774) 1.842SMARCB1, SMARCA4
regulation of cellular component organization (GO:0051128) 2.012SMARCB1, SMARCA4
positive regulation of signaling (GO:0023056) 2.412SMARCB1, SMARCA4
cellular biosynthetic process (GO:0044249) 1.372SMARCB1, SMARCA4
cellular nitrogen compound metabolic process (GO:0034641) 1.222SMARCB1, SMARCA4
cellular macromolecule biosynthetic process (GO:0034645) 1.662SMARCB1, SMARCA4
regulation of signaling (GO:0023051) 1.722SMARCB1, SMARCA4
positive regulation of cell communication (GO:0010647) 2.412SMARCB1, SMARCA4
regulation of cell communication (GO:0010646) 1.732SMARCB1, SMARCA4
protein complex disassembly (GO:0043241) 4.582SMARCB1, SMARCA4
single-organism process (GO:0044699) 0.482SMARCB1, SMARCA4
nucleobase-containing compound metabolic process (GO:0006139) 1.352SMARCB1, SMARCA4
regulation of viral life cycle (GO:1903900) 4.62SMARCB1, SMARCA4
positive regulation of viral life cycle (GO:1903902) 5.262SMARCB1, SMARCA4
modification by host of symbiont morphology or physiology (GO:0051851) 5.82SMARCB1, SMARCA4
regulation of viral transcription (GO:0046782) 5.622SMARCB1, SMARCA4
positive regulation of nucleic acid-templated transcription (GO:1903508) 2.562SMARCB1, SMARCA4
cellular process (GO:0009987) 0.262SMARCB1, SMARCA4
cellular aromatic compound metabolic process (GO:0006725) 1.32SMARCB1, SMARCA4
regulation of nucleic acid-templated transcription (GO:1903506) 1.552SMARCB1, SMARCA4
positive regulation of transcription, DNA-templated (GO:0045893) 2.562SMARCB1, SMARCA4
positive regulation by host of viral transcription (GO:0043923) 7.242SMARCB1, SMARCA4
positive regulation of sequence-specific DNA binding transcription factor activity (GO:0051091) 4.292SMARCB1, SMARCA4
regulation of sequence-specific DNA binding transcription factor activity (GO:0051090) 3.832SMARCB1, SMARCA4
chromatin remodeling (GO:0006338) 4.782SMARCB1, SMARCA4
nucleosome disassembly (GO:0006337) 6.92SMARCB1, SMARCA4
regulation of RNA metabolic process (GO:0051252) 1.522SMARCB1, SMARCA4
positive regulation of RNA metabolic process (GO:0051254) 2.512SMARCB1, SMARCA4
macromolecule metabolic process (GO:0043170) 0.832SMARCB1, SMARCA4
positive regulation of RNA biosynthetic process (GO:1902680) 2.542SMARCB1, SMARCA4
positive regulation of transcription from RNA polymerase I promoter (GO:0045943) 7.092SMARCB1, SMARCA4
positive regulation of transcription from RNA polymerase II promoter (GO:0045944) 2.812SMARCB1, SMARCA4
system development (GO:0048731) 2.922SMARCB1, SMARCA4
developmental process (GO:0032502) 1.362SMARCB1, SMARCA4
positive regulation of cellular biosynthetic process (GO:0031328) 2.32SMARCB1, SMARCA4
macromolecular complex subunit organization (GO:0043933) 2.142SMARCB1, SMARCA4
regulation of cellular biosynthetic process (GO:0031326) 1.382SMARCB1, SMARCA4
positive regulation of cellular metabolic process (GO:0031325) 1.812SMARCB1, SMARCA4
negative regulation of cellular metabolic process (GO:0031324) 2.012SMARCB1, SMARCA4
regulation of cellular metabolic process (GO:0031323) 1.072SMARCB1, SMARCA4
nucleic acid metabolic process (GO:0090304) 1.462SMARCB1, SMARCA4
modulation by host of symbiont transcription (GO:0052472) 6.682SMARCB1, SMARCA4
positive regulation of glucose mediated signaling pathway (GO:1902661) 8.632SMARCB1, SMARCA4
protein-DNA complex subunit organization (GO:0071824) 4.452SMARCB1, SMARCA4
macromolecular complex disassembly (GO:0032984) 4.532SMARCB1, SMARCA4
protein complex subunit organization (GO:0071822) 2.62SMARCB1, SMARCA4
chromatin organization (GO:0006325) 3.282SMARCB1, SMARCA4
regulation of cellular macromolecule biosynthetic process (GO:2000112) 1.462SMARCB1, SMARCA4
regulation of transcription from RNA polymerase I promoter (GO:0006356) 6.592SMARCB1, SMARCA4
organic substance metabolic process (GO:0071704) 0.632SMARCB1, SMARCA4
regulation of transcription from RNA polymerase II promoter (GO:0006357) 2.242SMARCB1, SMARCA4
regulation of gene expression (GO:0010468) 1.372SMARCB1, SMARCA4
protein-DNA complex disassembly (GO:0032986) 6.92SMARCB1, SMARCA4
positive regulation of nucleobase-containing compound metabolic process (GO:0045935) 2.352SMARCB1, SMARCA4
regulation of nucleobase-containing compound metabolic process (GO:0019219) 1.432SMARCB1, SMARCA4
single-organism developmental process (GO:0044767) 1.492SMARCB1, SMARCA4
biosynthetic process (GO:0009058) 1.322SMARCB1, SMARCA4
macromolecule biosynthetic process (GO:0009059) 1.612SMARCB1, SMARCA4
single-organism cellular process (GO:0044763) 0.652SMARCB1, SMARCA4
regulation of nitrogen compound metabolic process (GO:0051171) 1.362SMARCB1, SMARCA4
positive regulation of nitrogen compound metabolic process (GO:0051173) 2.292SMARCB1, SMARCA4
primary metabolic process (GO:0044238) 0.692SMARCB1, SMARCA4
nervous system development (GO:0007399) 3.532SMARCB1, SMARCA4
anatomical structure development (GO:0048856) 1.582SMARCB1, SMARCA4
cellular metabolic process (GO:0044237) 0.692SMARCB1, SMARCA4
positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter (GO:1901838) 7.942SMARCB1, SMARCA4
regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter (GO:1901836) 7.532SMARCB1, SMARCA4
positive regulation of viral process (GO:0048524) 5.112SMARCB1, SMARCA4
positive regulation of cellular process (GO:0048522) 1.32SMARCB1, SMARCA4
modification of morphology or physiology of other organism (GO:0035821) 5.122SMARCB1, SMARCA4
negative regulation of cellular process (GO:0048523) 1.412SMARCB1, SMARCA4
modulation by host of viral transcription (GO:0043921) 6.682SMARCB1, SMARCA4

NET-GE enrichment

Term New enriched termICP valueGenes
nucleosome organization (GO:0034728) -4.790.013SMARCB1, SMARCA4
hatching (GO:0035188) NEW9.040.0SMARCB1, SMARCA4
modulation by host of symbiont transcription (GO:0052472) -6.680.006SMARCB1, SMARCA4
positive regulation of viral transcription (GO:0050434) -6.070.003SMARCB1, SMARCA4
protein complex disassembly (GO:0043241) -4.580.017SMARCB1, SMARCA4
protein-DNA complex subunit organization (GO:0071824) -4.450.017SMARCB1, SMARCA4
DNA methylation (GO:0006306) NEW5.920.03SMARCB1, SMARCA4
DNA alkylation (GO:0006305) NEW5.920.03SMARCB1, SMARCA4
ATP-dependent chromatin remodeling (GO:0043044) -5.60.003SMARCB1, SMARCA4
modification by host of symbiont morphology or physiology (GO:0051851) -5.80.001SMARCB1, SMARCA4
protein-DNA complex disassembly (GO:0032986) -6.90.0SMARCB1, SMARCA4
modification of morphology or physiology of other organism involved in symbiotic interaction (GO:0051817) -5.270.003SMARCB1, SMARCA4
regulation of viral transcription (GO:0046782) -5.620.006SMARCB1, SMARCA4
organism emergence from protective structure (GO:0071684) NEW9.040.0SMARCB1, SMARCA4
regulation of viral process (GO:0050792) -3.890.022SMARCB1, SMARCA4
macromolecular complex disassembly (GO:0032984) -4.530.019SMARCB1, SMARCA4
positive regulation of multi-organism process (GO:0043902) -4.680.008SMARCB1, SMARCA4
regulation of symbiosis, encompassing mutualism through parasitism (GO:0043903) -3.820.029SMARCB1, SMARCA4
modulation by host of viral transcription (GO:0043921) -6.680.006SMARCB1, SMARCA4
positive regulation by host of viral transcription (GO:0043923) -7.240.001SMARCB1, SMARCA4
interaction with symbiont (GO:0051702) -5.760.001SMARCB1, SMARCA4
positive regulation of sequence-specific DNA binding transcription factor activity (GO:0051091) -4.290.044SMARCB1, SMARCA4
modulation of transcription in other organism involved in symbiotic interaction (GO:0052312) -6.640.0SMARCB1, SMARCA4
chromatin remodeling (GO:0006338) -4.780.014SMARCB1, SMARCA4
nucleosome disassembly (GO:0006337) -6.90.0SMARCB1, SMARCA4
blastocyst hatching (GO:0001835) NEW9.040.0SMARCB1, SMARCA4
positive regulation of viral process (GO:0048524) -5.110.006SMARCB1, SMARCA4
modification of morphology or physiology of other organism (GO:0035821) -5.120.005SMARCB1, SMARCA4
GO - cellular component annotation: shared terms / NET-GE enrichment

Shared terms

GOICNumber of genes with the same GOGenes
neuron part (GO:0097458) 2.642SMARCB1, SMARCA4
intracellular organelle (GO:0043229) 0.512SMARCB1, SMARCA4
non-membrane-bounded organelle (GO:0043228) 1.762SMARCB1, SMARCA4
chromatin (GO:0000785) 3.992SMARCB1, SMARCA4
membrane-bounded organelle (GO:0043227) 0.472SMARCB1, SMARCA4
organelle (GO:0043226) 0.42SMARCB1, SMARCA4
SWI/SNF superfamily-type complex (GO:0070603) 5.52SMARCB1, SMARCA4
nucleolus (GO:0005730) 3.062SMARCB1, SMARCA4
nucleus (GO:0005634) 1.072SMARCB1, SMARCA4
nucleoplasm (GO:0005654) 1.892SMARCB1, SMARCA4
nuclear chromosome part (GO:0044454) 3.672SMARCB1, SMARCA4
SWI/SNF complex (GO:0016514) 7.092SMARCB1, SMARCA4
nBAF complex (GO:0071565) 7.162SMARCB1, SMARCA4
nuclear chromatin (GO:0000790) 4.422SMARCB1, SMARCA4
BAF-type complex (GO:0090544) 6.672SMARCB1, SMARCA4
protein complex (GO:0043234) 1.512SMARCB1, SMARCA4
macromolecular complex (GO:0032991) 1.352SMARCB1, SMARCA4
intracellular membrane-bounded organelle (GO:0043231) 0.62SMARCB1, SMARCA4
intracellular non-membrane-bounded organelle (GO:0043232) 1.762SMARCB1, SMARCA4
cell part (GO:0044464) 0.112SMARCB1, SMARCA4
intracellular organelle part (GO:0044446) 0.812SMARCB1, SMARCA4
nuclear part (GO:0044428) 1.552SMARCB1, SMARCA4
npBAF complex (GO:0071564) 7.322SMARCB1, SMARCA4
intracellular part (GO:0044424) 0.282SMARCB1, SMARCA4
chromosomal part (GO:0044427) 3.182SMARCB1, SMARCA4
organelle part (GO:0044422) 0.792SMARCB1, SMARCA4

NET-GE enrichment

Term New enriched termICP valueGenes
SWI/SNF superfamily-type complex (GO:0070603) -5.50.0SMARCB1, SMARCA4
protein-DNA complex (GO:0032993) NEW5.030.031SMARCB1, SMARCA4
nuclear chromosome part (GO:0044454) -3.670.01SMARCB1, SMARCA4
nuclear chromatin (GO:0000790) -4.420.048SMARCB1, SMARCA4
nBAF complex (GO:0071565) -7.160.0SMARCB1, SMARCA4
npBAF complex (GO:0071564) -7.320.0SMARCB1, SMARCA4
SWI/SNF complex (GO:0016514) -7.090.0SMARCB1, SMARCA4
chromatin (GO:0000785) -3.990.008SMARCB1, SMARCA4
BAF-type complex (GO:0090544) -6.670.0SMARCB1, SMARCA4
chromosomal part (GO:0044427) -3.180.041SMARCB1, SMARCA4
chromosome (GO:0005694) NEW3.780.04SMARCB1, SMARCA4